RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 HSPB8Q9UJY1 196 aa9.75□□□□□ -0.85
CLK3-209ENST00000562670 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
CLK3-209ENST00000562670 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
CLK3-209ENST00000562670 NUDT3O95989 172 aa9.74□□□□□ -0.85
CLK3-209ENST00000562670 GYPEP15421 78 aa9.74□□□□□ -0.85
CLK3-209ENST00000562670 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
CLK3-209ENST00000562670 TOMM6Q96B49 74 aa9.74□□□□□ -0.85
CLK3-209ENST00000562670 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
CLK3-209ENST00000562670 CYSLTR1Q9Y271 337 aa9.73□□□□□ -0.85
CLK3-209ENST00000562670 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 ATP5LO75964 103 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 NPSP0C0P6 89 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
CLK3-209ENST00000562670 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
CLK3-209ENST00000562670 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
CLK3-209ENST00000562670 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 C20orf203Q8NBC4 194 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
CLK3-209ENST00000562670 HTN3P15516 51 aa9.71□□□□□ -0.86
CLK3-209ENST00000562670 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.86
CLK3-209ENST00000562670 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.86
CLK3-209ENST00000562670 TIMM17AQ99595 171 aa9.71□□□□□ -0.86
CLK3-209ENST00000562670 CHCHD7Q9BUK0 85 aa9.71□□□□□ -0.86
CLK3-209ENST00000562670 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 H7C423 109 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 TIRAPP58753 221 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 ERASQ7Z444 233 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
CLK3-209ENST00000562670 COL7A1Q02388 2944 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 A0A0J9YY99 117 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 SPATA12Q7Z6I5 190 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
CLK3-209ENST00000562670 TRBV25-1A0A075B6N4 114 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 A0A096LPF7 62 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 TRBV6-8A0A0A6YYG3 113 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 AKR1D1P51857 326 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 SMAGPQ0VAQ4 97 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 TMEM141Q96I45 108 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
CLK3-209ENST00000562670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
CLK3-209ENST00000562670 SMIM6P0DI80 62 aa9.67□□□□□ -0.86
CLK3-209ENST00000562670 JOSD1Q15040 202 aaPredicted RBP9.67□□□□□ -0.86
CLK3-209ENST00000562670 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
CLK3-209ENST00000562670 MRPL52Q86TS9 123 aaKnown RBP9.67□□□□□ -0.86
CLK3-209ENST00000562670 C15orf53Q8NAA6 179 aa9.67□□□□□ -0.86
CLK3-209ENST00000562670 SCGB3A1Q96QR1 104 aa9.67□□□□□ -0.86
CLK3-209ENST00000562670 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
CLK3-209ENST00000562670 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
CLK3-209ENST00000562670 SYS1-DBNDD2H3BUS1 97 aa9.66□□□□□ -0.86
CLK3-209ENST00000562670 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
CLK3-209ENST00000562670 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
CLK3-209ENST00000562670 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
CLK3-209ENST00000562670 KRTDAPP60985 99 aa9.65□□□□□ -0.86
CLK3-209ENST00000562670 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
CLK3-209ENST00000562670 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
CLK3-209ENST00000562670 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 C20orf202A1L168 122 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 PKIAP61925 76 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
CLK3-209ENST00000562670 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 LELP1Q5T871 98 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 LINC01545Q5VT33 79 aa9.64□□□□□ -0.87
CLK3-209ENST00000562670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
CLK3-209ENST00000562670 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
CLK3-209ENST00000562670 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
CLK3-209ENST00000562670 Q6ZN92 141 aa9.63□□□□□ -0.87
CLK3-209ENST00000562670 Q8N976 141 aa9.63□□□□□ -0.87
CLK3-209ENST00000562670 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
CLK3-209ENST00000562670 BAALCQ8WXS3 180 aa9.63□□□□□ -0.87
CLK3-209ENST00000562670 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
CLK3-209ENST00000562670 UBE2L6O14933 153 aa9.62□□□□□ -0.87
CLK3-209ENST00000562670 FGF6P10767 208 aa9.62□□□□□ -0.87
CLK3-209ENST00000562670 DYNC2H1Q8NCM8 4307 aaKnown RBP9.62□□□□□ -0.87
CLK3-209ENST00000562670 DNAH7Q8WXX0 4024 aa9.61□□□□□ -0.87
CLK3-209ENST00000562670 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 PRSS1P07477 247 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 ODF1Q14990 250 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 PMVKQ15126 192 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 AMELXQ99217 191 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
CLK3-209ENST00000562670 A0A087WX48 190 aa9.59□□□□□ -0.87
CLK3-209ENST00000562670 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
CLK3-209ENST00000562670 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
CLK3-209ENST00000562670 F8VRH5 84 aa9.58□□□□□ -0.88
CLK3-209ENST00000562670 SCGB1D1O95968 90 aa9.58□□□□□ -0.88
CLK3-209ENST00000562670 TCTAP57738 103 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms