RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 KIAA1644Q3SXP7 199 aa6.59□□□□□ -1.35
CLK3-208ENST00000562626 MPV17L2Q567V2 206 aa6.59□□□□□ -1.35
CLK3-208ENST00000562626 Q6ZRN7 208 aaPredicted RBP6.59□□□□□ -1.35
CLK3-208ENST00000562626 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.35
CLK3-208ENST00000562626 ST20Q9HBF5 79 aa6.59□□□□□ -1.35
CLK3-208ENST00000562626 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
CLK3-208ENST00000562626 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
CLK3-208ENST00000562626 Q8N976 141 aa6.58□□□□□ -1.36
CLK3-208ENST00000562626 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
CLK3-208ENST00000562626 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
CLK3-208ENST00000562626 IGHV1-24A0A0C4DH33 117 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
CLK3-208ENST00000562626 I3L3M4 83 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 SCO1O75880 301 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 ESDP10768 282 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 S100PP25815 95 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 C6orf223Q8N319 242 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 PRELID3AQ96N28 172 aa6.57□□□□□ -1.36
CLK3-208ENST00000562626 IGLV4-60A0A075B6I1 120 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 IBA57-AS1B1ANH7 110 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 PMCHP20382 165 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 AMTP48728 403 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 RBX1P62877 108 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 TNP2Q05952 138 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 COTL1Q14019 142 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 TMEM243Q9BU79 118 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 GNB1LQ9BYB4 327 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 HECTD4Q9Y4D8 3996 aa6.56□□□□□ -1.36
CLK3-208ENST00000562626 LOC389332A0A1B0GUA5 103 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 HLA-DQA1P01909 254 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 APCSP02743 223 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 CLPSL2Q6UWE3 100 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
CLK3-208ENST00000562626 Q9HAA7 133 aa6.55□□□□□ -1.36
CLK3-208ENST00000562626 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 VCYO14598 125 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 TCAPO15273 167 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 PPBPP02775 128 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 RPL32P62910 135 aaKnown RBP6.54□□□□□ -1.36
CLK3-208ENST00000562626 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 MAPKAPK5-AS1Q8N8E1 139 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
CLK3-208ENST00000562626 A0A087WX48 190 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 PHOX2AO14813 284 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 PPP1R17O96001 155 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 RPL39P62891 51 aaKnown RBP6.53□□□□□ -1.36
CLK3-208ENST00000562626 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.53□□□□□ -1.36
CLK3-208ENST00000562626 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
CLK3-208ENST00000562626 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
CLK3-208ENST00000562626 TRAV9-2A0A087WT02 112 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 ANGP03950 147 aaKnown RBP6.52□□□□□ -1.37
CLK3-208ENST00000562626 FGF6P10767 208 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
CLK3-208ENST00000562626 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 WFDC2Q14508 124 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 C10orf126Q8N4M7 172 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 UBE2WQ96B02 151 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
CLK3-208ENST00000562626 PKHD1P08F94 4074 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 A0A1B0GUV1 79 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 COLCA2A8K830 154 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 K7EP13 123 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 MT-ND6P03923 174 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 FUSP35637 526 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLK3-208ENST00000562626 LAGE3Q14657 143 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 COX19Q49B96 90 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 Q8N8P6 123 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
CLK3-208ENST00000562626 DNAH5Q8TE73 4624 aa6.5□□□□□ -1.37
CLK3-208ENST00000562626 UBE2L6O14933 153 aa6.5□□□□□ -1.37
CLK3-208ENST00000562626 FCER1GP30273 86 aa6.5□□□□□ -1.37
CLK3-208ENST00000562626 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
CLK3-208ENST00000562626 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
CLK3-208ENST00000562626 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
CLK3-208ENST00000562626 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
CLK3-208ENST00000562626 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
CLK3-208ENST00000562626 IGLV10-54A0A075B6I4 117 aa6.49□□□□□ -1.37
CLK3-208ENST00000562626 LRCOL1A6NCL2 159 aa6.49□□□□□ -1.37
CLK3-208ENST00000562626 REG3AQ06141 175 aa6.49□□□□□ -1.37
CLK3-208ENST00000562626 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms