RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
CDH13-205ENST00000562307 Q6ZN92 141 aa6.74□□□□□ -1.33
CDH13-205ENST00000562307 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
CDH13-205ENST00000562307 MDFIQ99750 246 aa6.74□□□□□ -1.33
CDH13-205ENST00000562307 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
CDH13-205ENST00000562307 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 NPSP0C0P6 89 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 RPL39P62891 51 aaKnown RBP6.73□□□□□ -1.33
CDH13-205ENST00000562307 COTL1Q14019 142 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 KPRPQ5T749 579 aaPredicted RBP6.73□□□□□ -1.33
CDH13-205ENST00000562307 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
CDH13-205ENST00000562307 DEFB104AQ8WTQ1 72 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 BAALCQ8WXS3 180 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 CHCHD7Q9BUK0 85 aa6.73□□□□□ -1.33
CDH13-205ENST00000562307 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
CDH13-205ENST00000562307 hDV102S1A0JD36 115 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 DPM2O94777 84 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 DEFB130BP0DP73 79 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 DEFB130AP0DP74 79 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 DDTP30046 118 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 HHLA3Q9XRX5 114 aa6.72□□□□□ -1.33
CDH13-205ENST00000562307 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 F8VRH5 84 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 IGKCP01834 107 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 SPART-AS1P0CW21 52 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 CRYBA4P53673 196 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 GAGE1Q13065 139 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 GAGE4Q13068 117 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 GAGE5Q13069 117 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 PMVKQ15126 192 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 PHLDA1Q8WV24 401 aaPredicted RBP6.71□□□□□ -1.34
CDH13-205ENST00000562307 PRADC1Q9BSG0 188 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 CST9LQ9H4G1 147 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 MRPL35Q9NZE8 188 aaKnown RBP6.71□□□□□ -1.34
CDH13-205ENST00000562307 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
CDH13-205ENST00000562307 CHTOPQ9Y3Y2 248 aaKnown RBP6.71□□□□□ -1.34
CDH13-205ENST00000562307 IGHV3-38A0A0C4DH36 116 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 TEX48A0A1B0GUV7 120 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 DEFB4AO15263 64 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 PLNP26678 52 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 SBSPONQ8IVN8 264 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
CDH13-205ENST00000562307 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 LOC100131303A0A0U1RQF7 123 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 DAD1P61803 113 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
CDH13-205ENST00000562307 AMELXQ99217 191 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 UQCR10Q9UDW1 63 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
CDH13-205ENST00000562307 ATP5G1P05496 136 aa6.68□□□□□ -1.34
CDH13-205ENST00000562307 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
CDH13-205ENST00000562307 ANKRD39Q53RE8 183 aa6.68□□□□□ -1.34
CDH13-205ENST00000562307 TMEM97Q5BJF2 176 aa6.68□□□□□ -1.34
CDH13-205ENST00000562307 STPG4Q8N801 248 aa6.68□□□□□ -1.34
CDH13-205ENST00000562307 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
CDH13-205ENST00000562307 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
CDH13-205ENST00000562307 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
CDH13-205ENST00000562307 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.67□□□□□ -1.34
CDH13-205ENST00000562307 IGKV2-29A2NJV5 120 aaPredicted RBP6.67□□□□□ -1.34
CDH13-205ENST00000562307 H7C423 109 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 K7EIL1 84 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 COX8AP10176 69 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 SMAGPQ0VAQ4 97 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 NFE4Q86UQ8 179 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
CDH13-205ENST00000562307 VCX2Q9H322 139 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 RETNQ9HD89 108 aa6.67□□□□□ -1.34
CDH13-205ENST00000562307 DLEU1O43261 78 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 PAX4O43316 350 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 GYPEP15421 78 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 C12orf74Q32Q52 190 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 ZC2HC1BQ5TFG8 222 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 TMEM243Q9BU79 118 aa6.66□□□□□ -1.34
CDH13-205ENST00000562307 TRBV25-1A0A075B6N4 114 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 TRAV26-1A0A087WT03 109 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 TRBV6-8A0A0A6YYG3 113 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 C11orf86A6NJI1 115 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 FGF6P10767 208 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 DEFA6Q01524 100 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 CEMP1Q6PRD7 247 aaPredicted RBP6.65□□□□□ -1.34
CDH13-205ENST00000562307 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
CDH13-205ENST00000562307 TM2D3Q9BRN9 247 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms