RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 AMTP48728 403 aa7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 SSBP4Q9BWG4 385 aaPredicted RBP7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 NKX6-2Q9C056 277 aaPredicted RBP7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 SMLR1H3BR10 107 aa7.23□□□□□ -1.25
NSMCE1-202ENST00000561960 REG3GQ6UW15 175 aa7.23□□□□□ -1.25
NSMCE1-202ENST00000561960 FAM213BQ8TBF2 198 aa7.23□□□□□ -1.25
NSMCE1-202ENST00000561960 MLST8Q9BVC4 326 aa7.23□□□□□ -1.25
NSMCE1-202ENST00000561960 XCL1P47992 114 aa7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 RASL11AQ6T310 242 aa7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 FER1L6-AS1Q8NA97 138 aa7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 SFT2D1Q8WV19 159 aa7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 CYTL1Q9NRR1 136 aa7.22□□□□□ -1.25
NSMCE1-202ENST00000561960 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 ARPC5O15511 151 aa7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 RPL35P42766 123 aaKnown RBP7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 SPINK6Q6UWN8 80 aa7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 OR2D3Q8NGH3 330 aa7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.26
NSMCE1-202ENST00000561960 H7C1H1 209 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 CXCL1P09341 107 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 FOXI1Q12951 378 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 COTL1Q14019 142 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 AMMECR1LQ6DCA0 310 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 TMUB2Q71RG4 321 aa7.2□□□□□ -1.26
NSMCE1-202ENST00000561960 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 RAB19A4D1S5 217 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 G3V3Q6 166 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 GIPP09681 153 aaPredicted RBP7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 IGLC6P0CF74 106 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 GAGE2BQ13066 116 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 CENPWQ5EE01 88 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 CFAP161Q6P656 301 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 AKAP14Q86UN6 197 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 NIT2Q9NQR4 276 aa7.19□□□□□ -1.26
NSMCE1-202ENST00000561960 FOXA3P55318 350 aaPredicted RBP7.18□□□□□ -1.26
NSMCE1-202ENST00000561960 CCL20P78556 96 aa7.18□□□□□ -1.26
NSMCE1-202ENST00000561960 KCNRGQ8N5I3 272 aa7.18□□□□□ -1.26
NSMCE1-202ENST00000561960 CARD19Q96LW7 228 aa7.18□□□□□ -1.26
NSMCE1-202ENST00000561960 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 CCL25O15444 150 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 BCL2P10415 239 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 NTF3P20783 257 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 Q6ZRP5 223 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 GATD1Q8NB37 220 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 TCEAL7Q9BRU2 100 aa7.17□□□□□ -1.26
NSMCE1-202ENST00000561960 S100A9P06702 114 aaKnown RBP7.16□□□□□ -1.26
NSMCE1-202ENST00000561960 FGF6P10767 208 aa7.16□□□□□ -1.26
NSMCE1-202ENST00000561960 PGLYRP4Q96LB8 373 aa7.16□□□□□ -1.26
NSMCE1-202ENST00000561960 KRTAP9-2Q9BYQ4 174 aa7.16□□□□□ -1.26
NSMCE1-202ENST00000561960 GNG13Q9P2W3 67 aa7.16□□□□□ -1.26
NSMCE1-202ENST00000561960 CACNG7P62955 275 aa7.15□□□□□ -1.26
NSMCE1-202ENST00000561960 TWIST1Q15672 202 aa7.15□□□□□ -1.26
NSMCE1-202ENST00000561960 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
NSMCE1-202ENST00000561960 SLC7A5P1Q8MH63 180 aa7.15□□□□□ -1.26
NSMCE1-202ENST00000561960 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
NSMCE1-202ENST00000561960 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.27
NSMCE1-202ENST00000561960 C19orf71A6NCJ1 209 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 IFNA1P01562 189 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 APCSP02743 223 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 MT-ND6P03923 174 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
NSMCE1-202ENST00000561960 LINC00959A0A1B0GUT2 108 aa7.13□□□□□ -1.27
NSMCE1-202ENST00000561960 H2AFB1P0C5Y9 115 aa7.13□□□□□ -1.27
NSMCE1-202ENST00000561960 RPL18AQ02543 176 aaKnown RBP7.13□□□□□ -1.27
NSMCE1-202ENST00000561960 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
NSMCE1-202ENST00000561960 MBD3L1Q8WWY6 194 aa7.13□□□□□ -1.27
NSMCE1-202ENST00000561960 TRBV20OR9-2A0A075B6H5 130 aa7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 IGLV4-69A0A075B6H9 119 aa7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 GNG4P50150 75 aa7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 RPS20P60866 119 aaKnown RBP7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 OPRPNQ99935 248 aaPredicted RBP7.12□□□□□ -1.27
NSMCE1-202ENST00000561960 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 CAMPP49913 170 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 PRR4Q16378 134 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 TMEM242Q9NWH2 141 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
NSMCE1-202ENST00000561960 FAM168BA1KXE4 195 aa7.1□□□□□ -1.27
NSMCE1-202ENST00000561960 SDHAF1A6NFY7 115 aa7.1□□□□□ -1.27
NSMCE1-202ENST00000561960 IFITM2Q01629 132 aa7.1□□□□□ -1.27
NSMCE1-202ENST00000561960 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
NSMCE1-202ENST00000561960 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
NSMCE1-202ENST00000561960 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.27
NSMCE1-202ENST00000561960 F2Z2F3 143 aa7.09□□□□□ -1.27
NSMCE1-202ENST00000561960 PMCHP20382 165 aa7.09□□□□□ -1.27
NSMCE1-202ENST00000561960 CTRLP40313 264 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms