RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 A0A087WWL8 130 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 S100A8P05109 93 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 ZFP2Q6ZN57 461 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
COMMD4-204ENST00000561662 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
COMMD4-204ENST00000561662 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 RAB4AP20338 218 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 COX19Q49B96 90 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
COMMD4-204ENST00000561662 RHODO00212 210 aa12.04□□□□□ -0.48
COMMD4-204ENST00000561662 CIDEAO60543 219 aa12.04□□□□□ -0.48
COMMD4-204ENST00000561662 RAB5AP20339 215 aa12.03□□□□□ -0.48
COMMD4-204ENST00000561662 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
COMMD4-204ENST00000561662 SMIM15Q7Z3B0 74 aa12.03□□□□□ -0.48
COMMD4-204ENST00000561662 IGHV3-73A0A0B4J1V6 119 aa12.02□□□□□ -0.49
COMMD4-204ENST00000561662 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
COMMD4-204ENST00000561662 SMIM17P0DL12 118 aa12.02□□□□□ -0.49
COMMD4-204ENST00000561662 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.49
COMMD4-204ENST00000561662 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
COMMD4-204ENST00000561662 PHOX2AO14813 284 aa12.01□□□□□ -0.49
COMMD4-204ENST00000561662 MT-ND6P03923 174 aa12.01□□□□□ -0.49
COMMD4-204ENST00000561662 GATA1P15976 413 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-204ENST00000561662 RAB4BP61018 213 aa12.01□□□□□ -0.49
COMMD4-204ENST00000561662 GAS8-AS1O95177 125 aa12□□□□□ -0.49
COMMD4-204ENST00000561662 OR10J3Q5JRS4 329 aa12□□□□□ -0.49
COMMD4-204ENST00000561662 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
COMMD4-204ENST00000561662 Q8N3U1 123 aa12□□□□□ -0.49
COMMD4-204ENST00000561662 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
COMMD4-204ENST00000561662 LRP2P98164 4655 aa11.99□□□□□ -0.49
COMMD4-204ENST00000561662 M0QY20 66 aa11.99□□□□□ -0.49
COMMD4-204ENST00000561662 APCSP02743 223 aa11.99□□□□□ -0.49
COMMD4-204ENST00000561662 MGPP08493 103 aa11.99□□□□□ -0.49
COMMD4-204ENST00000561662 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
COMMD4-204ENST00000561662 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
COMMD4-204ENST00000561662 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
COMMD4-204ENST00000561662 ZNF56Q15929 161 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 CIRBP-AS1Q8TBR5 109 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 Q9UF83 564 aa11.98□□□□□ -0.49
COMMD4-204ENST00000561662 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
COMMD4-204ENST00000561662 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
COMMD4-204ENST00000561662 FABP9Q0Z7S8 132 aa11.97□□□□□ -0.49
COMMD4-204ENST00000561662 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
COMMD4-204ENST00000561662 NRACQ8N912 160 aa11.97□□□□□ -0.49
COMMD4-204ENST00000561662 F5H697 171 aa11.96□□□□□ -0.49
COMMD4-204ENST00000561662 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
COMMD4-204ENST00000561662 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
COMMD4-204ENST00000561662 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
COMMD4-204ENST00000561662 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
COMMD4-204ENST00000561662 D6R8Y8 96 aa11.95□□□□□ -0.5
COMMD4-204ENST00000561662 NCR2O95944 276 aa11.95□□□□□ -0.5
COMMD4-204ENST00000561662 PPBPP02775 128 aa11.95□□□□□ -0.5
COMMD4-204ENST00000561662 TRGC2P03986 189 aa11.95□□□□□ -0.5
COMMD4-204ENST00000561662 CKS2P33552 79 aa11.94□□□□□ -0.5
COMMD4-204ENST00000561662 TIRAPP58753 221 aa11.94□□□□□ -0.5
COMMD4-204ENST00000561662 RPL39LQ96EH5 51 aaKnown RBP11.94□□□□□ -0.5
COMMD4-204ENST00000561662 ALKBH7Q9BT30 221 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-204ENST00000561662 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
COMMD4-204ENST00000561662 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
COMMD4-204ENST00000561662 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
COMMD4-204ENST00000561662 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
COMMD4-204ENST00000561662 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
COMMD4-204ENST00000561662 H7C1H1 209 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 NPYP01303 97 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 RPL37AP61513 92 aaKnown RBP11.92□□□□□ -0.5
COMMD4-204ENST00000561662 RHOHQ15669 191 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-204ENST00000561662 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
COMMD4-204ENST00000561662 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
COMMD4-204ENST00000561662 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
COMMD4-204ENST00000561662 MT1HL1P0DM35 61 aa11.91□□□□□ -0.5
COMMD4-204ENST00000561662 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
COMMD4-204ENST00000561662 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
COMMD4-204ENST00000561662 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
COMMD4-204ENST00000561662 PPP1R17O96001 155 aa11.89□□□□□ -0.51
COMMD4-204ENST00000561662 LAGE3Q14657 143 aa11.89□□□□□ -0.51
COMMD4-204ENST00000561662 LELP1Q5T871 98 aa11.89□□□□□ -0.51
COMMD4-204ENST00000561662 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
COMMD4-204ENST00000561662 C20orf78Q9BR46 151 aa11.89□□□□□ -0.51
COMMD4-204ENST00000561662 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
COMMD4-204ENST00000561662 TNXBP22105 4242 aa11.89□□□□□ -0.51
COMMD4-204ENST00000561662 TRBV7-3A0A075B6L6 115 aa11.88□□□□□ -0.51
COMMD4-204ENST00000561662 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
COMMD4-204ENST00000561662 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
COMMD4-204ENST00000561662 UBE2D3P61077 147 aa11.87□□□□□ -0.51
COMMD4-204ENST00000561662 SUMO2P61956 95 aaKnown RBP11.87□□□□□ -0.51
COMMD4-204ENST00000561662 UBE2D2P62837 147 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms