RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 GAGE12BA1L429 117 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 SYS1-DBNDD2H3BUS1 97 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 VCYO14598 125 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 CIDEAO60543 219 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 GAGE7O76087 117 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 NUDT3O95989 172 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 GAGE12FP0CL80 117 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 GAGE12GP0CL81 117 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 GAGE12IP0CL82 117 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 TEX43Q6ZNM6 134 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 SPATA12Q7Z6I5 190 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 LINC00612Q8N6U2 182 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 RNF183Q96D59 192 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 KIR2DL4Q99706 377 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 MAP1LC3CQ9BXW4 147 aa5.34□□□□□ -1.55
TPM1-231ENST00000561395 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 LYRM9A8MSI8 78 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 K7EQD1 137 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 TSHBP01222 138 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 MIFP14174 115 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 EMP1P54849 157 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 RHOHQ15669 191 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 Q8NAQ8 132 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 OR11H2Q8NH07 326 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 TOMM6Q96B49 74 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 IFI27L1Q96BM0 104 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 DNAJC30Q96LL9 226 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 C18orf15Q96N68 181 aa5.33□□□□□ -1.56
TPM1-231ENST00000561395 TRBV10-1A0A0K0K1A3 114 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 C20orf202A1L168 122 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 I3L3M4 83 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 S100A12P80511 92 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 LINC01545Q5VT33 79 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 Q9UF83 564 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 TP53TG1Q9Y2A0 90 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
TPM1-231ENST00000561395 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 LINC01549A6NIU2 74 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 H0Y8G0 127 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 ATP5LO75964 103 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 DEFB130BP0DP73 79 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 DEFB130AP0DP74 79 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 G0S2P27469 103 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 FAM222AQ5U5X8 452 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 SLC25A29Q8N8R3 303 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 TM2D3Q9BRN9 247 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 DKK2Q9UBU2 259 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 CYSLTR1Q9Y271 337 aa5.31□□□□□ -1.56
TPM1-231ENST00000561395 TRBV7-3A0A075B6L6 115 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 TRGV4A0A0C4DH28 118 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 DEFB4AO15263 64 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 RPL36AP83881 106 aaKnown RBP5.3□□□□□ -1.56
TPM1-231ENST00000561395 FHL2Q14192 279 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 LGALS9CQ6DKI2 356 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 RPL36ALQ969Q0 106 aaKnown RBP5.3□□□□□ -1.56
TPM1-231ENST00000561395 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 VAMP8Q9BV40 100 aa5.3□□□□□ -1.56
TPM1-231ENST00000561395 KMT2AQ03164 3969 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.29□□□□□ -1.56
TPM1-231ENST00000561395 UBE2D3P61077 147 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 UBE2D2P62837 147 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 RPL39P62891 51 aaKnown RBP5.29□□□□□ -1.56
TPM1-231ENST00000561395 ERASQ7Z444 233 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 ATOH7Q8N100 152 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 ZNF664Q8N3J9 261 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 ZNRF2Q8NHG8 242 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 LINC00476Q8WZB0 136 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 RETNQ9HD89 108 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 CELA1Q9UNI1 258 aa5.29□□□□□ -1.56
TPM1-231ENST00000561395 TRAV9-2A0A087WT02 112 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 TRAV12-1A0A0B4J245 112 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 IGHV3-38A0A0C4DH36 116 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 TEX48A0A1B0GUV7 120 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 IGIPA6NJ69 53 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 SPART-AS1P0CW21 52 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 LINC00694P0DN24 101 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 DAD1P61803 113 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 PKIAP61925 76 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 COTL1Q14019 142 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 Q6ZN92 141 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 DAZ4Q86SG3 579 aaKnown RBP5.28□□□□□ -1.56
TPM1-231ENST00000561395 C20orf203Q8NBC4 194 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 PHLDA1Q8WV24 401 aaPredicted RBP5.28□□□□□ -1.56
TPM1-231ENST00000561395 BAALCQ8WXS3 180 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 TIMM17AQ99595 171 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 PRADC1Q9BSG0 188 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 CHCHD7Q9BUK0 85 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
TPM1-231ENST00000561395 DAZ3Q9NR90 486 aaKnown RBP5.28□□□□□ -1.56
TPM1-231ENST00000561395 KLK5Q9Y337 293 aaPredicted RBP5.28□□□□□ -1.56
TPM1-231ENST00000561395 PAM16Q9Y3D7 125 aa5.28□□□□□ -1.56
TPM1-231ENST00000561395 A0A087WX48 190 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms