RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM231AP0DMU4 169 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 FAM231CP0DMU5 169 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 PSMB8P28062 276 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 DDTP30046 118 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 TSPOP30536 169 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 CTRLP40313 264 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 CMC4P56277 68 aaPredicted RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 SNRPD3P62318 126 aaKnown RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 HAMPP81172 84 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 SLAQ13239 276 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 FAM104BQ5XKR9 115 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 Q6ZVQ6 151 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 NIT1Q86X76 327 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 ORMDL3Q8N138 153 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 FER1L6-AS1Q8NA97 138 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 Q8NBF4 154 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 C18orf32Q8TCD1 76 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 ZC2HC1AQ96GY0 325 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 UBE2E2Q96LR5 201 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 VAMP8Q9BV40 100 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 RHPN1-AS1Q9BWJ2 59 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 MAP1LC3CQ9BXW4 147 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 CNFNQ9BYD5 112 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 TMEM191AQ9H0A3 160 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 NRN1Q9NPD7 142 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 SMPXQ9UHP9 88 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 S4R3C0 116 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 TRAV2A0A0B4J234 112 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 GRIFINA4D1Z8 144 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 HSBP1L1C9JCN9 74 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 K7EQD1 137 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 DEFB4AO15263 64 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 CRXO43186 299 aaPredicted RBP2.25□□□□□ -2.05
SPG11-225ENST00000561391 DUSP14O95147 198 aaKnown RBP2.25□□□□□ -2.05
SPG11-225ENST00000561391 LEPROTL1O95214 131 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 SNRPCP09234 159 aaKnown RBP2.25□□□□□ -2.05
SPG11-225ENST00000561391 IGLC6P0CF74 106 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 CKS2P33552 79 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 LEPP41159 167 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 CRIP1P50238 77 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 KRTDAPP60985 99 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 DEFB135Q30KP9 77 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 EBLN2Q6P2I7 272 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 RNASEKQ6P5S7 137 aaKnown RBP2.25□□□□□ -2.05
SPG11-225ENST00000561391 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 TEX43Q6ZNM6 134 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 FA2HQ7L5A8 372 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 UBE2DNLQ8IWF7 75 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 ZNF738Q8NE65 137 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 OR10AG1Q8NH19 301 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 ODF3Q96PU9 254 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 C20orf144Q9BQM9 153 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 MIEN1Q9BRT3 115 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 TMEM70Q9BUB7 260 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 TPPP3Q9BW30 176 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 AGPAT4-IT1Q9H0P7 198 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 MAP1LC3AQ9H492 121 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 NXT2Q9NPJ8 142 aaKnown RBP2.25□□□□□ -2.05
SPG11-225ENST00000561391 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
SPG11-225ENST00000561391 TRAV9-2A0A087WT02 112 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 IGKV2-40A0A087WW87 121 aaPredicted RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 TRAV8-2A0A0B4J237 113 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-35A0A0C4DH35 117 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 OR4C46A6NHA9 309 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 LINC00587B1AMM8 73 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 M0R143 59 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 SOCS3O14543 225 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 TCAPO15273 167 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 NUPR1O60356 82 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 NXPH4O95158 308 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 IGKV2D-40P01614 121 aaPredicted RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 LGALS1P09382 135 aaKnown RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 ARMS2P0C7Q2 107 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 NTF3P20783 257 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 S100A4P26447 101 aaKnown RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 CTAG1AP78358 180 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 GDF5OSQ5U4N7 250 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 ZNF705AQ6ZN79 300 aaPredicted RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 APRG1Q8IVJ8 170 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 ZNF664Q8N3J9 261 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 OR8A1Q8NGG7 326 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 DEFB104AQ8WTQ1 72 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 MRAP2Q96G30 205 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 PRELID3AQ96N28 172 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 PMCHL2Q9BQD1 86 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 C20orf78Q9BR46 151 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 NDUFAF3Q9BU61 184 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 MS4A6AQ9H2W1 248 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 ST20Q9HBF5 79 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 UQCR10Q9UDW1 63 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 TP53TG3Q9ULZ0 132 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 PHLDA3Q9Y5J5 127 aa2.24□□□□□ -2.05
SPG11-225ENST00000561391 LRP1Q07954 4544 aaKnown RBP2.24□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3OR16-8A0A075B7F1 116 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 TMSB15BA0A087X1C1 80 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 TRAV25A0A0B4J276 109 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 IGKV3D-20A0A0C4DH25 116 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms