RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	TRAV4	A0A0B4J268	109 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	MDFIC2	A0A1B0GVS7	189 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	C2orf70	A6NJV1	201 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	KNCN	A6PVL3	124 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235		A8MWL6	223 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235		J3QRE1	110 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	CD3D	P04234	171 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	CXCL8	P10145	99 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	FGF6	P10767	208 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	COX6A1	P12074	109 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	CTLA4	P16410	223 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	RPL30	P62888	115 aa	Known RBP	2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	OR5AS1	Q8N127	324 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	H1FX	Q92522	213 aa	Known RBP	2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	FXYD5	Q96DB9	178 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	NMNAT3	Q96T66	252 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	AMELY	Q99218	206 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	SMR3A	Q99954	134 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF286A	Q9HBT8	521 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	IL36B	Q9NZH7	164 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	ARL2-SNX15	V9GYD0	113 aa		2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	SCN3A	Q9NY46	2000 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	TRGV5	A0A0B4J1U4	118 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	TRAV2	A0A0B4J234	112 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	SDCBP	O00560	298 aa	Predicted RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	NDUFB3	O43676	98 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	OR1I1	O60431	355 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	COL8A2	P25067	703 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	RPS11	P62280	158 aa	Known RBP eCLIP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	UBE2L3	P68036	154 aa	Known RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	LGALS9B	Q3B8N2	356 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	KRTAP13-2	Q52LG2	175 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	TMEM170B	Q5T4T1	132 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	NCBP2-AS2	Q69YL0	99 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	C2orf91	Q6ZV80	131 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	C6orf201	Q7Z4U5	140 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	ZGRF1	Q86YA3	2104 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	PDPN	Q86YL7	162 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	EXOC3-AS1	Q8N2X6	119 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM57A	Q8TBR7	257 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	TSKU	Q8WUA8	353 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	NAA38	Q9BRA0	125 aa	Known RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	SHANK2-AS3	Q9BTD1	123 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM103A1	Q9BTL3	118 aa	Known RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	CHCHD7	Q9BUK0	85 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	DAZ1	Q9NQZ3	744 aa	Known RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	TIMM9	Q9Y5J7	89 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235		U3KQA8	63 aa		2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	NCOA6	Q14686	2063 aa	Predicted RBP	2.97	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM236A	A0A1B0GUQ0	79 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	UBE2L5P	A0A1B0GUS4	154 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	FAM236B	A0A1B0GV22	79 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	OOSP1	A8MZH6	123 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	IGLL5	B9A064	214 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235		C9JCJ5	164 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235		H3BT86	120 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	NUPR1	O60356	82 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	BCE1	O60756	84 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	LEPROTL1	O95214	131 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	CPSF4	O95639	269 aa	Known RBP	2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	IGKC	P01834	107 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	COX6B1	P14854	86 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	HMGA1	P17096	107 aa	Known RBP	2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	FKBP2	P26885	142 aa	Known RBP	2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	CSN1S1	P47710	185 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	CCL8	P80075	99 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	ATP5L2	Q7Z4Y8	100 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	FAM19A3	Q7Z5A8	133 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	SPANXA2-OT1	Q8N9U9	137 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	LY6G5B	Q8NDX9	201 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	TRGV9	Q99603	122 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	AICDA	Q9GZX7	198 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	DYNLRB1	Q9NP97	96 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	GNG13	Q9P2W3	67 aa		2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	RPUSD1	Q9UJJ7	312 aa	Known RBP	2.96	□□□□□ -1.94
TCF12-223	ENST00000561235	PRKDC	P78527	4128 aa	Known RBP	2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	TRAV17	A0A0B4J275	112 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	IGHV1-3	A0A0C4DH29	117 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	IGHV1-58	A0A0C4DH39	117 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	CEBPZOS	A8MTT3	80 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235		F2Z2F3	143 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235		J3QLW9	94 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	NDUFC1	O43677	76 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	PEBP1	P30086	187 aa	Known RBP	2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	DYNLT1	P63172	113 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	LINC00643	Q86TS7	51 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	ORMDL3	Q8N138	153 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	PCLO	Q9Y6V0	5065 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	MGAM2	Q2M2H8	2515 aa		2.95	□□□□□ -1.94
TCF12-223	ENST00000561235	IGHV1-45	A0A0A0MS14	117 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	GRIFIN	A4D1Z8	144 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	C10orf142	B7Z368	130 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	NPY	P01303	97 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	LGALS3	P17931	250 aa	Known RBP	2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	DEFB109B	Q30KR1	87 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	LUZP6	Q538Z0	58 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	C1orf140	Q5VVS0	124 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	LGALS9C	Q6DKI2	356 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	MYO7B	Q6PIF6	2116 aa		2.94	□□□□□ -1.94
TCF12-223	ENST00000561235	LINC00305	Q7Z4B0	112 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms