RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 Q8N976 141 aa10.56□□□□□ -0.72
LMX1B-204ENST00000561065 TMEM243Q9BU79 118 aa10.56□□□□□ -0.72
LMX1B-204ENST00000561065 HERC1Q15751 4861 aa10.55□□□□□ -0.72
LMX1B-204ENST00000561065 MIAQ16674 131 aa10.55□□□□□ -0.72
LMX1B-204ENST00000561065 ATRAIDQ6UW56 229 aa10.55□□□□□ -0.72
LMX1B-204ENST00000561065 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
LMX1B-204ENST00000561065 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
LMX1B-204ENST00000561065 A0A1B0GW15 77 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 NCR2O95944 276 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
LMX1B-204ENST00000561065 S100A8P05109 93 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 C14orf177Q52M58 125 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 GATD1Q8NB37 220 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 V9GYV3 84 aa10.54□□□□□ -0.72
LMX1B-204ENST00000561065 A0A1B0GUV1 79 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 AMTP48728 403 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 GAGE6Q13070 117 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 MPV17L2Q567V2 206 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 TMEM70Q9BUB7 260 aa10.53□□□□□ -0.72
LMX1B-204ENST00000561065 PPP1R2P9O14990 202 aa10.52□□□□□ -0.73
LMX1B-204ENST00000561065 PMCHP20382 165 aa10.52□□□□□ -0.73
LMX1B-204ENST00000561065 NUP35Q8NFH5 326 aa10.52□□□□□ -0.73
LMX1B-204ENST00000561065 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
LMX1B-204ENST00000561065 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
LMX1B-204ENST00000561065 H7C423 109 aa10.51□□□□□ -0.73
LMX1B-204ENST00000561065 RBX1P62877 108 aa10.51□□□□□ -0.73
LMX1B-204ENST00000561065 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
LMX1B-204ENST00000561065 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
LMX1B-204ENST00000561065 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.5□□□□□ -0.73
LMX1B-204ENST00000561065 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
LMX1B-204ENST00000561065 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
LMX1B-204ENST00000561065 C9JQL5 133 aa10.5□□□□□ -0.73
LMX1B-204ENST00000561065 I3L3M4 83 aa10.5□□□□□ -0.73
LMX1B-204ENST00000561065 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
LMX1B-204ENST00000561065 SMAGPQ0VAQ4 97 aa10.5□□□□□ -0.73
LMX1B-204ENST00000561065 PNRC1Q12796 327 aaPredicted RBP10.5□□□□□ -0.73
LMX1B-204ENST00000561065 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 SMIM27A0A1W2PRY6 76 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 F8W036 122 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 Q6ZSA8 131 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
LMX1B-204ENST00000561065 APCSP02743 223 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 RAB4AP20338 218 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 PRR34Q9NV39 138 aa10.48□□□□□ -0.73
LMX1B-204ENST00000561065 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
LMX1B-204ENST00000561065 LINC00862A6NCI5 91 aa10.47□□□□□ -0.73
LMX1B-204ENST00000561065 MT-ND4LP03901 98 aa10.47□□□□□ -0.73
LMX1B-204ENST00000561065 INAFM2P0DMQ5 153 aa10.47□□□□□ -0.73
LMX1B-204ENST00000561065 REG3AQ06141 175 aa10.47□□□□□ -0.73
LMX1B-204ENST00000561065 CLLU1Q5K131 121 aa10.47□□□□□ -0.73
LMX1B-204ENST00000561065 VCYO14598 125 aa10.46□□□□□ -0.73
LMX1B-204ENST00000561065 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.73
LMX1B-204ENST00000561065 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
LMX1B-204ENST00000561065 TCAPO15273 167 aa10.45□□□□□ -0.74
LMX1B-204ENST00000561065 CAMPP49913 170 aa10.45□□□□□ -0.74
LMX1B-204ENST00000561065 AMN1Q8IY45 258 aa10.45□□□□□ -0.74
LMX1B-204ENST00000561065 ANAPC16Q96DE5 110 aa10.45□□□□□ -0.74
LMX1B-204ENST00000561065 ZNF25P17030 456 aaPredicted RBP10.44□□□□□ -0.74
LMX1B-204ENST00000561065 FCER1GP30273 86 aa10.44□□□□□ -0.74
LMX1B-204ENST00000561065 FAM104BQ5XKR9 115 aa10.44□□□□□ -0.74
LMX1B-204ENST00000561065 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
LMX1B-204ENST00000561065 UQCC3Q6UW78 93 aa10.44□□□□□ -0.74
LMX1B-204ENST00000561065 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
LMX1B-204ENST00000561065 DMBT1Q9UGM3 2413 aaPredicted RBP10.43□□□□□ -0.74
LMX1B-204ENST00000561065 CKS2P33552 79 aa10.43□□□□□ -0.74
LMX1B-204ENST00000561065 HBBP68871 147 aa10.43□□□□□ -0.74
LMX1B-204ENST00000561065 ATP5L2Q7Z4Y8 100 aa10.43□□□□□ -0.74
LMX1B-204ENST00000561065 CLRN3Q8NCR9 226 aa10.43□□□□□ -0.74
LMX1B-204ENST00000561065 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
LMX1B-204ENST00000561065 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 PPBPP02775 128 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 POLR2KP53803 58 aaKnown RBP10.42□□□□□ -0.74
LMX1B-204ENST00000561065 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 C20orf78Q9BR46 151 aa10.42□□□□□ -0.74
LMX1B-204ENST00000561065 SUMO2P61956 95 aaKnown RBP10.41□□□□□ -0.74
LMX1B-204ENST00000561065 DGAT2L7PQ6IED9 249 aa10.41□□□□□ -0.74
LMX1B-204ENST00000561065 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
LMX1B-204ENST00000561065 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
LMX1B-204ENST00000561065 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
LMX1B-204ENST00000561065 FGF6P10767 208 aa10.4□□□□□ -0.74
LMX1B-204ENST00000561065 KRTAP26-1Q6PEX3 210 aa10.4□□□□□ -0.74
LMX1B-204ENST00000561065 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
LMX1B-204ENST00000561065 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
LMX1B-204ENST00000561065 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
LMX1B-204ENST00000561065 C7orf77A4D0Y5 90 aa10.39□□□□□ -0.75
LMX1B-204ENST00000561065 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
LMX1B-204ENST00000561065 MRPL54Q6P161 138 aaKnown RBP10.39□□□□□ -0.75
LMX1B-204ENST00000561065 OR5A1Q8NGJ0 315 aa10.39□□□□□ -0.75
LMX1B-204ENST00000561065 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
LMX1B-204ENST00000561065 TRBV24-1A0A075B6N3 115 aa10.38□□□□□ -0.75
LMX1B-204ENST00000561065 USP17L23D6RBM5 183 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms