RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 COX6B2Q6YFQ2 88 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 NRARPQ7Z6K4 114 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 PACRGLQ8N7B6 248 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 TMEM229BQ8NBD8 167 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 SMIM8Q96KF7 97 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 PFDN5Q99471 154 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 KIR2DL4Q99706 377 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 GGACTQ9BVM4 153 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 IL36BQ9NZH7 164 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 MTFP1Q9UDX5 166 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 RABL2BQ9UNT1 228 aa1.97□□□□□ -2.09
HERC1-211ENST00000560983 IGLV4-69A0A075B6H9 119 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 IGLV4-3A0A075B6K6 122 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 IGHV1-24A0A0C4DH33 117 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 RAB3DO95716 219 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 GCGP01275 180 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 ARMS2P0C7Q2 107 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 VPREB1P12018 145 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 RPL29P47914 159 aaKnown RBP1.96□□□□□ -2.1
HERC1-211ENST00000560983 SULT1A2P50226 295 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 RAB4BP61018 213 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 FAM229BQ4G0N7 80 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 MIR17HGQ75NE6 70 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 DYNC2LI1Q8TCX1 351 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 HYLS1Q96M11 299 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 OR5AC2Q9NZP5 309 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 RABL2AQ9UBK7 228 aaPredicted RBP1.96□□□□□ -2.1
HERC1-211ENST00000560983 PSG8Q9UQ74 426 aa1.96□□□□□ -2.1
HERC1-211ENST00000560983 S100A4P26447 101 aaKnown RBP1.95□□□□□ -2.1
HERC1-211ENST00000560983 TAS2R19P59542 299 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 UBE2BP63146 152 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 RPL18AQ02543 176 aaKnown RBP1.95□□□□□ -2.1
HERC1-211ENST00000560983 DNLZQ5SXM8 178 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 GOLT1AQ6ZVE7 132 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 FAM19A5Q7Z5A7 132 aaPredicted RBP1.95□□□□□ -2.1
HERC1-211ENST00000560983 DAND5Q8N907 189 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 OR5A1Q8NGJ0 315 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 OR5C1Q8NGR4 320 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 ZNF471Q9BX82 626 aaPredicted RBP1.95□□□□□ -2.1
HERC1-211ENST00000560983 NMES1Q9C002 83 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 WDR83OSQ9Y284 106 aa1.95□□□□□ -2.1
HERC1-211ENST00000560983 IGKV2D-26A0A0A0MRZ7 120 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 SMIM31A0A1B0GVY4 71 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 H3BVH4 76 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 M0QXV9 152 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 SSSCA1O60232 199 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 TSC22D2O75157 780 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 APOA1P02647 267 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 ESDP10768 282 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 ANXA3P12429 323 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 FGF7P21781 194 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 TGFBR1P36897 503 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 XCL1P47992 114 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 C3orf22Q8N5N4 141 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.94□□□□□ -2.1
HERC1-211ENST00000560983 ISOC2Q96AB3 205 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 C2orf48Q96LS8 159 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 MED28Q9H204 178 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 OTORQ9NRC9 128 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 FLVCR2Q9UPI3 526 aa1.94□□□□□ -2.1
HERC1-211ENST00000560983 C19orf71A6NCJ1 209 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 DISC1C4P0D8 188 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 KRBOX1C9JBD0 128 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 M0R381 172 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 CCL25O15444 150 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 NUPR1O60356 82 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 ATP5HO75947 161 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 RPL12P30050 165 aaKnown RBP1.93□□□□□ -2.1
HERC1-211ENST00000560983 RPL28P46779 137 aaKnown RBP1.93□□□□□ -2.1
HERC1-211ENST00000560983 CRIP1P50238 77 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 TAS2R30P59541 319 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 GNG5P63218 68 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 SMUG1Q53HV7 270 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 CLVS1Q8IUQ0 354 aaPredicted RBP1.93□□□□□ -2.1
HERC1-211ENST00000560983 LINC00167Q96N53 147 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 CAMK2N2Q96S95 79 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 C11orf1Q9H5F2 150 aa1.93□□□□□ -2.1
HERC1-211ENST00000560983 LYRM2Q9NU23 88 aaPredicted RBP1.93□□□□□ -2.1
HERC1-211ENST00000560983 PIGBOS1A0A0B4J2F0 54 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 LINC00959A0A1B0GUT2 108 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 C7orf66A4D0T2 115 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 GRIFINA4D1Z8 144 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 M0QY20 66 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 BCE1O60756 84 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 HPGDSO60760 199 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 TLX1NBP0CAT3 122 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 GABARAPL2P60520 117 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 CD164L2Q6UWJ8 174 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 PRNTQ86SH4 94 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 OR2D3Q8NGH3 330 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 SCGB3A2Q96PL1 93 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 PRRT1Q99946 306 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 UQCC1Q9NVA1 299 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms