RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 FHL2Q14192 279 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 GAGE12JA6NER3 117 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 DDTP30046 118 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 GAGE1Q13065 139 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 GAGE4Q13068 117 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 GAGE5Q13069 117 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 GAGE13Q4V321 117 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
USP3-AS1-208ENST00000560962 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
USP3-AS1-208ENST00000560962 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
USP3-AS1-208ENST00000560962 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
USP3-AS1-208ENST00000560962 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 A0A087WX48 190 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 COTL1Q14019 142 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 RETNQ9HD89 108 aa12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
USP3-AS1-208ENST00000560962 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
USP3-AS1-208ENST00000560962 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 K7EIL1 84 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 UBE2D3P61077 147 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 UBE2D2P62837 147 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 C14orf144Q96I85 54 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 PRSS29PA6NIE9 313 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 STPG4Q8N801 248 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 CELA1Q9UNI1 258 aa12.58□□□□□ -0.4
USP3-AS1-208ENST00000560962 IGKCP01834 107 aa12.57□□□□□ -0.4
USP3-AS1-208ENST00000560962 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
USP3-AS1-208ENST00000560962 TCTAP57738 103 aa12.57□□□□□ -0.4
USP3-AS1-208ENST00000560962 MIEN1Q9BRT3 115 aa12.57□□□□□ -0.4
USP3-AS1-208ENST00000560962 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
USP3-AS1-208ENST00000560962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 IGKV2-29A2NJV5 120 aaPredicted RBP12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 DPM2O94777 84 aa12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 HHLA3Q9XRX5 114 aa12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
USP3-AS1-208ENST00000560962 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 DAD1P61803 113 aa12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
USP3-AS1-208ENST00000560962 F8VRH5 84 aa12.54□□□□□ -0.4
USP3-AS1-208ENST00000560962 PMVKQ15126 192 aa12.54□□□□□ -0.4
USP3-AS1-208ENST00000560962 CEMP1Q6PRD7 247 aaPredicted RBP12.54□□□□□ -0.4
USP3-AS1-208ENST00000560962 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
USP3-AS1-208ENST00000560962 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
USP3-AS1-208ENST00000560962 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
USP3-AS1-208ENST00000560962 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
USP3-AS1-208ENST00000560962 UQCR10Q9UDW1 63 aa12.53□□□□□ -0.4
USP3-AS1-208ENST00000560962 TEX48A0A1B0GUV7 120 aa12.53□□□□□ -0.4
USP3-AS1-208ENST00000560962 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.41
USP3-AS1-208ENST00000560962 CRYBA4P53673 196 aa12.52□□□□□ -0.41
USP3-AS1-208ENST00000560962 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
USP3-AS1-208ENST00000560962 PLNP26678 52 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 KRTAP21-3Q3LHN1 58 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 PYGO1Q9Y3Y4 419 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 GYPEP15421 78 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 DEFA6Q01524 100 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 DEFB121Q5J5C9 76 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
USP3-AS1-208ENST00000560962 FAM104AQ969W3 186 aa12.5□□□□□ -0.41
USP3-AS1-208ENST00000560962 ATP5G1P05496 136 aa12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 VCX2Q9H322 139 aa12.49□□□□□ -0.41
USP3-AS1-208ENST00000560962 PAX4O43316 350 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 HTN3P15516 51 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 A0A0J9YY99 117 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 GTSF1LQ9H1H1 148 aa12.48□□□□□ -0.41
USP3-AS1-208ENST00000560962 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
USP3-AS1-208ENST00000560962 F5H768 121 aa12.47□□□□□ -0.41
USP3-AS1-208ENST00000560962 NMUP48645 174 aa12.47□□□□□ -0.41
USP3-AS1-208ENST00000560962 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
USP3-AS1-208ENST00000560962 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
USP3-AS1-208ENST00000560962 IGKV2D-26A0A0A0MRZ7 120 aa12.46□□□□□ -0.41
USP3-AS1-208ENST00000560962 COX8AP10176 69 aa12.46□□□□□ -0.41
USP3-AS1-208ENST00000560962 PAPPA-AS1Q5QFB9 102 aa12.46□□□□□ -0.41
USP3-AS1-208ENST00000560962 C12orf74Q32Q52 190 aa12.46□□□□□ -0.42
USP3-AS1-208ENST00000560962 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.42
USP3-AS1-208ENST00000560962 Q6ZUT4 128 aa12.46□□□□□ -0.42
USP3-AS1-208ENST00000560962 VSIG2Q96IQ7 327 aa12.46□□□□□ -0.42
USP3-AS1-208ENST00000560962 AMELXQ99217 191 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms