RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 NACAE9PAV3 2078 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 PRSS29PA6NIE9 313 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 STPG4Q8N801 248 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 ANK2Q01484 3957 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 LYRM9A8MSI8 78 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 NPSP0C0P6 89 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 COX8AP10176 69 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 EMP1P54849 157 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 COTL1Q14019 142 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 FHL2Q14192 279 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 PMVKQ15126 192 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 CHCHD7Q9BUK0 85 aa9.16□□□□□ -0.94
SNX1-211ENST00000560829 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
SNX1-211ENST00000560829 UBE2D3P61077 147 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 UBE2D2P62837 147 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
SNX1-211ENST00000560829 OR11H2Q8NH07 326 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 RNF183Q96D59 192 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
SNX1-211ENST00000560829 DNAH3Q8TD57 4116 aa9.15□□□□□ -0.94
SNX1-211ENST00000560829 MIFP14174 115 aa9.15□□□□□ -0.95
SNX1-211ENST00000560829 CST9LQ9H4G1 147 aa9.15□□□□□ -0.95
SNX1-211ENST00000560829 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.95
SNX1-211ENST00000560829 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
SNX1-211ENST00000560829 CRYBA4P53673 196 aa9.14□□□□□ -0.95
SNX1-211ENST00000560829 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
SNX1-211ENST00000560829 Q8NAQ8 132 aa9.14□□□□□ -0.95
SNX1-211ENST00000560829 PHLDA1Q8WV24 401 aaPredicted RBP9.14□□□□□ -0.95
SNX1-211ENST00000560829 IGHV3-38A0A0C4DH36 116 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 FGF6P10767 208 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 IGHV4-28A0A0C4DH34 117 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 M0R143 59 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 DLEU1O43261 78 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 CTAG1AP78358 180 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
SNX1-211ENST00000560829 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 GAGE1Q13065 139 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 GAGE4Q13068 117 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 GAGE5Q13069 117 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 LBHQ53QV2 105 aaPredicted RBP9.12□□□□□ -0.95
SNX1-211ENST00000560829 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 SNHG12Q9BXW3 62 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 UBE2D4Q9Y2X8 147 aa9.12□□□□□ -0.95
SNX1-211ENST00000560829 AMELXQ99217 191 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 GTSF1LQ9H1H1 148 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 MAST4O15021 2626 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 EREGO14944 169 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 NTM-AS1Q6ZSK4 140 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
SNX1-211ENST00000560829 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
SNX1-211ENST00000560829 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
SNX1-211ENST00000560829 G3V4G9 280 aa9.1□□□□□ -0.95
SNX1-211ENST00000560829 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
SNX1-211ENST00000560829 VCX2Q9H322 139 aa9.1□□□□□ -0.95
SNX1-211ENST00000560829 STAB1Q9NY15 2570 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
SNX1-211ENST00000560829 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
SNX1-211ENST00000560829 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 NMUP48645 174 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
SNX1-211ENST00000560829 SIVA1O15304 175 aa9.08□□□□□ -0.96
SNX1-211ENST00000560829 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
SNX1-211ENST00000560829 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
SNX1-211ENST00000560829 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
SNX1-211ENST00000560829 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
SNX1-211ENST00000560829 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
SNX1-211ENST00000560829 E9PLD3 99 aa9.07□□□□□ -0.96
SNX1-211ENST00000560829 DEFB4AO15263 64 aa9.07□□□□□ -0.96
SNX1-211ENST00000560829 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
SNX1-211ENST00000560829 TCTAP57738 103 aa9.07□□□□□ -0.96
SNX1-211ENST00000560829 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
SNX1-211ENST00000560829 DAD1P61803 113 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 TMEM97Q5BJF2 176 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 H7C423 109 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
SNX1-211ENST00000560829 Q6ZUT4 128 aa9.05□□□□□ -0.96
SNX1-211ENST00000560829 TMEM243Q9BU79 118 aa9.05□□□□□ -0.96
SNX1-211ENST00000560829 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
SNX1-211ENST00000560829 COL6A5A8TX70 2615 aa9.05□□□□□ -0.96
SNX1-211ENST00000560829 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
SNX1-211ENST00000560829 ATP5G1P05496 136 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms