RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 AMTP48728 403 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 PKIAP61925 76 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 DMRTA1Q5VZB9 504 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 SCXQ7RTU7 201 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 FER1L6-AS1Q8NA97 138 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 TPPP3Q9BW30 176 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 HHLA3Q9XRX5 114 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 TSTD3H0UI37 97 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 ORM1P02763 201 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 ANXA2RQ3ZCQ2 193 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
TPM1-225ENST00000560679 NIT1Q86X76 327 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 C10orf126Q8N4M7 172 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 LINC00477Q96M19 166 aa6.57□□□□□ -1.36
TPM1-225ENST00000560679 C7orf71A4D174 169 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 KLLNB2CW77 178 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 HSBP1O75506 76 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 Q6ZQT7 251 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 CHCHD1Q96BP2 118 aaKnown RBP6.56□□□□□ -1.36
TPM1-225ENST00000560679 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 Q9HAA7 133 aa6.56□□□□□ -1.36
TPM1-225ENST00000560679 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 GYPEP15421 78 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 NTF3P20783 257 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 PRR9Q5T870 116 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 PRO1933Q9H354 126 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 C11orf21Q9P2W6 132 aa6.55□□□□□ -1.36
TPM1-225ENST00000560679 IGHV3-38A0A0C4DH36 116 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 RAB4AP20338 218 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
TPM1-225ENST00000560679 KRTDAPP60985 99 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 ZNF415Q09FC8 603 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 LINC01556Q5JQF7 62 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 FAM19A2Q8N3H0 131 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 ZFAND2AQ8N6M9 145 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 ZNF479Q96JC4 524 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
TPM1-225ENST00000560679 TRAV21A0A0B4J279 112 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 LOC100131303A0A0U1RQF7 123 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 DDTP30046 118 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 TWIST1Q15672 202 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
TPM1-225ENST00000560679 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 Q8N976 141 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
TPM1-225ENST00000560679 TRGV4A0A0C4DH28 118 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 IGHV1-24A0A0C4DH33 117 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 MUC21A0A0G2JKD1 596 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 MUC21A0A140T8X8 626 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 D6R8Y8 96 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 LECT2O14960 151 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 SNAI2O43623 268 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 OR5AL1P0C617 328 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 LINC00614P0C842 121 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 RNASE4P34096 147 aaKnown RBP6.52□□□□□ -1.37
TPM1-225ENST00000560679 CACNG7P62955 275 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 MUC21Q5SSG8 566 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 AMN1Q8IY45 258 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 ORMDL3Q8N138 153 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
TPM1-225ENST00000560679 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
TPM1-225ENST00000560679 IGHV1OR15-1A0A075B7D0 117 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 PPBPP02775 128 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 TIRAPP58753 221 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 CTAG1AP78358 180 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 CIRBP-AS1Q8TBR5 109 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 VAMP8Q9BV40 100 aa6.51□□□□□ -1.37
TPM1-225ENST00000560679 RS1O15537 224 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 CKS2P33552 79 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 ASIPP42127 132 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 SSTP61278 116 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 SMIM15Q7Z3B0 74 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 Q8N3U1 123 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 PRSS3P2Q8NHM4 247 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 RNF185Q96GF1 192 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 AP5S1Q9NUS5 200 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
TPM1-225ENST00000560679 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 H3BVH4 76 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 LEPROTL1O95214 131 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 NCR2O95944 276 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 NPYP01303 97 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 LAGE3Q14657 143 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
TPM1-225ENST00000560679 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms