RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 KLK15Q9H2R5 256 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 CLPSL1A2RUU4 121 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 A6NDX4 124 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 C9JAW5 83 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 TIMM17BO60830 172 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 INSL3P51460 131 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
CCDC33-209ENST00000560565 NDPQ00604 133 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 LINC01620Q4KN68 170 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 CLEC19AQ6UXS0 136 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 BRD3OSQ6XYD6 125 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 RNF182Q8N6D2 247 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 ZNF580Q9UK33 172 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 SELENOKQ9Y6D0 94 aa6.42□□□□□ -1.38
CCDC33-209ENST00000560565 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 IGLV4-69A0A075B6H9 119 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV3-23P01764 117 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 ZFAND2AQ8N6M9 145 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.41□□□□□ -1.38
CCDC33-209ENST00000560565 C5orf56Q8N8D9 126 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 EDA2RQ9HAV5 297 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 PYGO1Q9Y3Y4 419 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 S4R3C0 116 aa6.41□□□□□ -1.38
CCDC33-209ENST00000560565 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 TRAV41A0A0B4J266 112 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 H3BUX3 64 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 I3L3M4 83 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 K7EMT4 169 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 ATP6V0E1O15342 81 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
CCDC33-209ENST00000560565 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 IGFL4Q6B9Z1 124 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 GPHB5Q86YW7 130 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM86BQ8N661 226 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM263Q8WUH6 116 aaKnown RBP6.4□□□□□ -1.38
CCDC33-209ENST00000560565 CARD19Q96LW7 228 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 OVOL2Q9BRP0 275 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 PPDPFQ9H3Y8 114 aa6.4□□□□□ -1.38
CCDC33-209ENST00000560565 MGAM2Q2M2H8 2515 aa6.4□□□□□ -1.39
CCDC33-209ENST00000560565 TRGV11A0A075B6L2 103 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 A4D1N5 150 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 DNAJC9-AS1A6NH13 148 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 KLLNB2CW77 178 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 F5H697 171 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
CCDC33-209ENST00000560565 PF4V1P10720 104 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
CCDC33-209ENST00000560565 DEFB112Q30KQ8 113 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 Q6YL49 198 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 DUX5Q96PT3 197 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 FAM110AQ9BQ89 295 aa6.39□□□□□ -1.39
CCDC33-209ENST00000560565 ZNF256Q9Y2P7 627 aaPredicted RBP6.39□□□□□ -1.39
CCDC33-209ENST00000560565 SOCS3O14543 225 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 IGHG2P01859 326 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 IGF1P05019 195 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 CRYGDP07320 174 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 SNRPD3P62318 126 aaKnown RBP6.38□□□□□ -1.39
CCDC33-209ENST00000560565 DEFB121Q5J5C9 76 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 SUMO4Q6EEV6 95 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 Q8N1Y9 231 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
CCDC33-209ENST00000560565 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
CCDC33-209ENST00000560565 TRBV7-7A0A0K0K1E9 115 aa6.37□□□□□ -1.39
CCDC33-209ENST00000560565 TMEM89A2RUT3 159 aa6.37□□□□□ -1.39
CCDC33-209ENST00000560565 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
CCDC33-209ENST00000560565 RNASE3P12724 160 aaKnown RBP6.37□□□□□ -1.39
CCDC33-209ENST00000560565 C3orf56Q8N813 242 aa6.37□□□□□ -1.39
CCDC33-209ENST00000560565 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
CCDC33-209ENST00000560565 DAZ1Q9NQZ3 744 aaKnown RBP6.37□□□□□ -1.39
CCDC33-209ENST00000560565 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
CCDC33-209ENST00000560565 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 RPL11P62913 178 aaKnown RBP6.36□□□□□ -1.39
CCDC33-209ENST00000560565 MIAQ16674 131 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 C19orf54Q5BKX5 351 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 CFAP161Q6P656 301 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 TMEM219Q86XT9 240 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 KLHL30-AS1Q8NEE0 82 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 PTH2Q96A98 100 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 ICOSQ9Y6W8 199 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
CCDC33-209ENST00000560565 VWFP04275 2813 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 TINCRA0A1B0GVN0 87 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms