RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 IGHV1-24A0A0C4DH33 117 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 C16orf90A8MZG2 172 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 M0QY20 66 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
LRRC28-219ENST00000560483 LINC00694P0DN24 101 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 BTF3P20290 206 aaKnown RBP5.41□□□□□ -1.54
LRRC28-219ENST00000560483 PKIAP61925 76 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 COTL1Q14019 142 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 CLLU1Q5K131 121 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 SPATA12Q7Z6I5 190 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 NUP35Q8NFH5 326 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 UBE2WQ96B02 151 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 RMI2Q96E14 147 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 NIT2Q9NQR4 276 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 KLK12Q9UKR0 248 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 V9GYV3 84 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 TRAV8-3A0A0A6YYJ7 113 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 FAM231BA6NCW3 169 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 F8W036 122 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 PPP1R2P9O14990 202 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 MT-ND4LP03901 98 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 PMCHP20382 165 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 AMTP48728 403 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 MRPL54Q6P161 138 aaKnown RBP5.4□□□□□ -1.54
LRRC28-219ENST00000560483 COMMD7Q86VX2 200 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 NIT1Q86X76 327 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 RPL39LQ96EH5 51 aaKnown RBP5.4□□□□□ -1.54
LRRC28-219ENST00000560483 TM2D2Q9BX73 214 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 CNFNQ9BYD5 112 aa5.4□□□□□ -1.54
LRRC28-219ENST00000560483 DNAH17Q9UFH2 4485 aa5.4□□□□□ -1.55
LRRC28-219ENST00000560483 IBA57-AS1B1ANH7 110 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 APCSP02743 223 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 S100A8P05109 93 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 PNRC1Q12796 327 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-219ENST00000560483 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 GATD1Q8NB37 220 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 TMEM243Q9BU79 118 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 TMEM191AQ9H0A3 160 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 ST20Q9HBF5 79 aa5.39□□□□□ -1.55
LRRC28-219ENST00000560483 FAT2Q9NYQ8 4349 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 IGKV3OR2-268A0A0C4DH90 116 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 SMIM27A0A1W2PRY6 76 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 SMKR1H3BMG3 65 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 NCR2O95944 276 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 IFITM2Q01629 132 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 LAGE3Q14657 143 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 MPV17L2Q567V2 206 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 RNASEKQ6P5S7 137 aaKnown RBP5.38□□□□□ -1.55
LRRC28-219ENST00000560483 ATRAIDQ6UW56 229 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 Q8N976 141 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 CHCHD7Q9BUK0 85 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
LRRC28-219ENST00000560483 A0A1B0GVY2 172 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 A0A1B0GW15 77 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 SDHAF1A6NFY7 115 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 LECT2O14960 151 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 HLA-DQA1P01909 254 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 RAB4AP20338 218 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 FCER1GP30273 86 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 CKS2P33552 79 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 FUSP35637 526 aaKnown RBP eCLIP5.37□□□□□ -1.55
LRRC28-219ENST00000560483 HBBP68871 147 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 Q0VG73 95 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 UQCC3Q6UW78 93 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 FRZBQ92765 325 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 MRAP2Q96G30 205 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
LRRC28-219ENST00000560483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-219ENST00000560483 A0A087WTM6 91 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 IGKV2-29A2NJV5 120 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-219ENST00000560483 I3L3M4 83 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 PPP1R17O96001 155 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 RBX1P62877 108 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 IQCJQ1A5X6 159 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 NTM-AS1Q6ZSK4 140 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 LINC00269Q8N2A0 174 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 TMEM242Q9NWH2 141 aa5.36□□□□□ -1.55
LRRC28-219ENST00000560483 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 IGLV10-54A0A075B6I4 117 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-219ENST00000560483 IGLV5-52A0A0A0MRZ9 124 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 TMEM218A2RU14 115 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 MRPL51Q4U2R6 128 aaKnown RBP5.35□□□□□ -1.55
LRRC28-219ENST00000560483 FAM104BQ5XKR9 115 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 DGAT2L7PQ6IED9 249 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-219ENST00000560483 BAALCQ8WXS3 180 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
LRRC28-219ENST00000560483 D6R8Y8 96 aa5.34□□□□□ -1.55
LRRC28-219ENST00000560483 VCYO14598 125 aa5.34□□□□□ -1.55
LRRC28-219ENST00000560483 GAS8-AS1O95177 125 aa5.34□□□□□ -1.55
LRRC28-219ENST00000560483 S100PP25815 95 aa5.34□□□□□ -1.55
LRRC28-219ENST00000560483 RPS10P46783 165 aaKnown RBP5.34□□□□□ -1.55
LRRC28-219ENST00000560483 REG3AQ06141 175 aa5.34□□□□□ -1.55
LRRC28-219ENST00000560483 MIAQ16674 131 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms