RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 UBE2D1P51668 147 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 NPC2P61916 151 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 NUMA1Q14980 2115 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 VMA21Q3ZAQ7 101 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 FBXL19-AS1Q494R0 122 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 MRPL51Q4U2R6 128 aaKnown RBP2.31□□□□□ -2.04
CRNDE-208ENST00000560029 KIAA2026Q5HYC2 2103 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 FAM27BQ5VT28 67 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 AAED1Q7RTV5 226 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 LINC00643Q86TS7 51 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 PLEKHB2Q96CS7 222 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 DYNLRB1Q9NP97 96 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 MRPL35Q9NZE8 188 aaKnown RBP2.31□□□□□ -2.04
CRNDE-208ENST00000560029 HHLA3Q9XRX5 114 aa2.31□□□□□ -2.04
CRNDE-208ENST00000560029 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 TRAV17A0A0B4J275 112 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 TRBV6-1A0A0K0K1D8 114 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 F8VRH5 84 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 J3QQQ9 107 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 M0R3E3 92 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 EFNA4P52798 201 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 CCL8P80075 99 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 Q5XG85 94 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 LYZL1Q6UWQ5 148 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 LINC00305Q7Z4B0 112 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 RPS19BP1Q86WX3 136 aaKnown RBP2.3□□□□□ -2.04
CRNDE-208ENST00000560029 TMEM86BQ8N661 226 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 Q8N8P6 123 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
CRNDE-208ENST00000560029 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 TM2D3Q9BRN9 247 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 AGPAT4-IT1Q9H0P7 198 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 COL4A6Q14031 1691 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 SCN10AQ9Y5Y9 1956 aa2.3□□□□□ -2.04
CRNDE-208ENST00000560029 MPDZO75970 2070 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 MUC22E2RYF6 1773 aaPredicted RBP2.29□□□□□ -2.04
CRNDE-208ENST00000560029 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 LINC01546A6NGU7 62 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 KNCNA6PVL3 124 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 LYZL6O75951 148 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 HRES1P13985 223 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 SLC25A16P16260 332 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
CRNDE-208ENST00000560029 ERHP84090 104 aaKnown RBP2.29□□□□□ -2.04
CRNDE-208ENST00000560029 LINC00322Q6ZN03 302 aaPredicted RBP2.29□□□□□ -2.04
CRNDE-208ENST00000560029 SERP2Q8N6R1 65 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 TMEM75Q8N9X5 138 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 C10orf105Q8TEF2 133 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 FXYD5Q96DB9 178 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 FAM167A-AS1Q96KT0 104 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 METTL26Q96S19 204 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 CCL26Q9Y258 94 aa2.29□□□□□ -2.04
CRNDE-208ENST00000560029 SVILO95425 2214 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 TRAV12-2A0A075B6T6 113 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 IGHV3-43A0A0B4J1X8 118 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 TRBV30A0A0K0K1B3 111 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 DEFB108AA8MXU0 73 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 CCL16O15467 120 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 FREM3P0C091 2139 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 PSMB8P28062 276 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 PRCDQ00LT1 54 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 DEFB121Q5J5C9 76 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 EXOC3-AS1Q8N2X6 119 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 LINC01600Q96MT4 127 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 RPUSD1Q9UJJ7 312 aaKnown RBP2.28□□□□□ -2.04
CRNDE-208ENST00000560029 TP53TG1Q9Y2A0 90 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 R4GN34 69 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 NCOA6Q14686 2063 aaPredicted RBP2.28□□□□□ -2.04
CRNDE-208ENST00000560029 ATG2BQ96BY7 2078 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 HEATR5BQ9P2D3 2071 aa2.28□□□□□ -2.04
CRNDE-208ENST00000560029 PCDH15Q96QU1 1955 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 IGHV3-15A0A0B4J1V0 119 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 TRAV3A0A0B4J244 114 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 UPK2O00526 184 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 SH2D1AO60880 128 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 DNAL4O96015 105 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 IGHG2P01859 326 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
CRNDE-208ENST00000560029 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
CRNDE-208ENST00000560029 FAM201AQ5SY85 155 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 Q6ZT83 130 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 LINC00337Q8N6G1 96 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 WFDC11Q8NEX6 87 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 TMEM263Q8WUH6 116 aaKnown RBP2.27□□□□□ -2.05
CRNDE-208ENST00000560029 DPH3P1Q9H4G8 78 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 TMEM14BQ9NUH8 114 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 ICOSQ9Y6W8 199 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 SPTBP11277 2137 aa2.27□□□□□ -2.05
CRNDE-208ENST00000560029 IGKV1OR2-108A0A075B7D4 117 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms