RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 I3L3M4 83 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 ATP5LO75964 103 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 TSHBP01222 138 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 G0S2P27469 103 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 RHOHQ15669 191 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 Q6ZTC4 211 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
TPM1-219ENST00000559397 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
TPM1-219ENST00000559397 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
TPM1-219ENST00000559397 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
TPM1-219ENST00000559397 K7EQD1 137 aa11.62□□□□□ -0.55
TPM1-219ENST00000559397 PKIAP61925 76 aa11.62□□□□□ -0.55
TPM1-219ENST00000559397 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
TPM1-219ENST00000559397 FHL2Q14192 279 aa11.61□□□□□ -0.55
TPM1-219ENST00000559397 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
TPM1-219ENST00000559397 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
TPM1-219ENST00000559397 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 PCP4L1A6NKN8 68 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 H0Y8G0 127 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 ATP5G1P05496 136 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 ERASQ7Z444 233 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
TPM1-219ENST00000559397 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
TPM1-219ENST00000559397 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 WWC2-AS2Q96NR7 200 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
TPM1-219ENST00000559397 PRSS1P07477 247 aa11.58□□□□□ -0.56
TPM1-219ENST00000559397 RPL36AP83881 106 aaKnown RBP11.58□□□□□ -0.56
TPM1-219ENST00000559397 ODF1Q14990 250 aa11.58□□□□□ -0.56
TPM1-219ENST00000559397 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
TPM1-219ENST00000559397 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
TPM1-219ENST00000559397 RPL36ALQ969Q0 106 aaKnown RBP11.58□□□□□ -0.56
TPM1-219ENST00000559397 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
TPM1-219ENST00000559397 DEFB131BA0A096LNP1 70 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 TRAV10A0A0B4J240 114 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 TSTD3H0UI37 97 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 HTN3P15516 51 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
TPM1-219ENST00000559397 TIMM17AQ99595 171 aa11.57□□□□□ -0.56
TPM1-219ENST00000559397 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 F5H768 121 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 UBE2D3P61077 147 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 UBE2D2P62837 147 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
TPM1-219ENST00000559397 SPATA45Q537H7 98 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 Q6ZN92 141 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 A0A087WX48 190 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 COTL1Q14019 142 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
TPM1-219ENST00000559397 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
TPM1-219ENST00000559397 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
TPM1-219ENST00000559397 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
TPM1-219ENST00000559397 HHLA3Q9XRX5 114 aa11.54□□□□□ -0.56
TPM1-219ENST00000559397 IGHV3-38A0A0C4DH36 116 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 CRYBA4P53673 196 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 GAGE1Q13065 139 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 GAGE4Q13068 117 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 GAGE5Q13069 117 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 MUC7Q8TAX7 377 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
TPM1-219ENST00000559397 LOC100131303A0A0U1RQF7 123 aa11.52□□□□□ -0.56
TPM1-219ENST00000559397 hDV102S1A0JD36 115 aa11.52□□□□□ -0.56
TPM1-219ENST00000559397 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.56
TPM1-219ENST00000559397 PRO0255Q9UI72 69 aa11.52□□□□□ -0.56
TPM1-219ENST00000559397 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.56
TPM1-219ENST00000559397 LYSTQ99698 3801 aa11.52□□□□□ -0.56
TPM1-219ENST00000559397 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
TPM1-219ENST00000559397 MRPL35Q9NZE8 188 aaKnown RBP11.52□□□□□ -0.57
TPM1-219ENST00000559397 TRAV26-1A0A087WT03 109 aa11.51□□□□□ -0.57
TPM1-219ENST00000559397 DPM2O94777 84 aa11.51□□□□□ -0.57
TPM1-219ENST00000559397 NPSP0C0P6 89 aa11.51□□□□□ -0.57
TPM1-219ENST00000559397 A0A0J9YY99 117 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 HSBP1L1C9JCN9 74 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 F8VRH5 84 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 DDTP30046 118 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
TPM1-219ENST00000559397 PAX4O43316 350 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 IGKCP01834 107 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 IGLC3P0DOY3 106 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 PMVKQ15126 192 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
TPM1-219ENST00000559397 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms