RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 NRACQ8N912 160 aa11.52□□□□□ -0.57
PSEN1-224ENST00000559361 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.57
PSEN1-224ENST00000559361 Q9UF83 564 aa11.52□□□□□ -0.57
PSEN1-224ENST00000559361 SDHAF1A6NFY7 115 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 TCAPO15273 167 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 NCR2O95944 276 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
PSEN1-224ENST00000559361 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 UPK3BQ9BT76 320 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
PSEN1-224ENST00000559361 TRAPPC1Q9Y5R8 145 aa11.51□□□□□ -0.57
PSEN1-224ENST00000559361 NBDYA0A0U1RRE5 68 aa11.5□□□□□ -0.57
PSEN1-224ENST00000559361 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
PSEN1-224ENST00000559361 RPS10P46783 165 aaKnown RBP11.5□□□□□ -0.57
PSEN1-224ENST00000559361 LELP1Q5T871 98 aa11.5□□□□□ -0.57
PSEN1-224ENST00000559361 TMEM70Q9BUB7 260 aa11.5□□□□□ -0.57
PSEN1-224ENST00000559361 MRPS16Q9Y3D3 137 aaKnown RBP11.5□□□□□ -0.57
PSEN1-224ENST00000559361 TRBV27A0A0K0K1C4 114 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 I3L3M4 83 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 VCYO14598 125 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 FABP9Q0Z7S8 132 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 ESRGQ1W209 222 aa11.49□□□□□ -0.57
PSEN1-224ENST00000559361 COLCA2A8K830 154 aa11.48□□□□□ -0.57
PSEN1-224ENST00000559361 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
PSEN1-224ENST00000559361 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
PSEN1-224ENST00000559361 COTL1Q14019 142 aa11.48□□□□□ -0.57
PSEN1-224ENST00000559361 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 SCO1O75880 301 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 NPYP01303 97 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 RAB5AP20339 215 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 PKIAP61925 76 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
PSEN1-224ENST00000559361 VPS13BQ7Z7G8 4022 aa11.46□□□□□ -0.57
PSEN1-224ENST00000559361 PMCHP20382 165 aa11.46□□□□□ -0.57
PSEN1-224ENST00000559361 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
PSEN1-224ENST00000559361 SMIM2Q9BVW6 85 aa11.46□□□□□ -0.57
PSEN1-224ENST00000559361 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
PSEN1-224ENST00000559361 IGHV1-24A0A0C4DH33 117 aa11.45□□□□□ -0.58
PSEN1-224ENST00000559361 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
PSEN1-224ENST00000559361 K7EMI3 77 aa11.45□□□□□ -0.58
PSEN1-224ENST00000559361 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
PSEN1-224ENST00000559361 ALKBH7Q9BT30 221 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-224ENST00000559361 NXT2Q9NPJ8 142 aaKnown RBP11.45□□□□□ -0.58
PSEN1-224ENST00000559361 FLG2Q5D862 2391 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-224ENST00000559361 FAT1Q14517 4588 aa11.44□□□□□ -0.58
PSEN1-224ENST00000559361 K7EP13 123 aa11.44□□□□□ -0.58
PSEN1-224ENST00000559361 KIAA1644Q3SXP7 199 aa11.44□□□□□ -0.58
PSEN1-224ENST00000559361 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
PSEN1-224ENST00000559361 FCER1GP30273 86 aa11.43□□□□□ -0.58
PSEN1-224ENST00000559361 CHCHD7Q9BUK0 85 aa11.43□□□□□ -0.58
PSEN1-224ENST00000559361 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
PSEN1-224ENST00000559361 SIVA1O15304 175 aa11.42□□□□□ -0.58
PSEN1-224ENST00000559361 AMTP48728 403 aa11.42□□□□□ -0.58
PSEN1-224ENST00000559361 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
PSEN1-224ENST00000559361 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
PSEN1-224ENST00000559361 H7C423 109 aa11.41□□□□□ -0.58
PSEN1-224ENST00000559361 TSHBP01222 138 aa11.41□□□□□ -0.58
PSEN1-224ENST00000559361 NTM-AS1Q6ZSK4 140 aa11.41□□□□□ -0.58
PSEN1-224ENST00000559361 Q8N8P6 123 aa11.41□□□□□ -0.58
PSEN1-224ENST00000559361 Q9H8V8 135 aa11.41□□□□□ -0.58
PSEN1-224ENST00000559361 EPM2AB3EWF7 344 aa11.4□□□□□ -0.58
PSEN1-224ENST00000559361 TRGC2P03986 189 aa11.4□□□□□ -0.58
PSEN1-224ENST00000559361 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.58
PSEN1-224ENST00000559361 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
PSEN1-224ENST00000559361 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 UBE2L6O14933 153 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 BTF3P20290 206 aaKnown RBP11.39□□□□□ -0.59
PSEN1-224ENST00000559361 G0S2P27469 103 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 TMEM18Q96B42 140 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 CHCHD5Q9BSY4 110 aa11.39□□□□□ -0.59
PSEN1-224ENST00000559361 LOC389332A0A1B0GUA5 103 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 RAB5BP61020 215 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 ORMDL2Q53FV1 153 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 NIT1Q86X76 327 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
PSEN1-224ENST00000559361 A0A087WX48 190 aa11.37□□□□□ -0.59
PSEN1-224ENST00000559361 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
PSEN1-224ENST00000559361 ESDP10768 282 aa11.37□□□□□ -0.59
PSEN1-224ENST00000559361 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
PSEN1-224ENST00000559361 KRTAP1-5Q9BYS1 174 aa11.37□□□□□ -0.59
PSEN1-224ENST00000559361 LINC01546A6NGU7 62 aa11.36□□□□□ -0.59
PSEN1-224ENST00000559361 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
PSEN1-224ENST00000559361 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-224ENST00000559361 A0A1B0GUV1 79 aa11.35□□□□□ -0.59
PSEN1-224ENST00000559361 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
PSEN1-224ENST00000559361 IFI27P40305 119 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-224ENST00000559361 LAGE3Q14657 143 aa11.35□□□□□ -0.59
PSEN1-224ENST00000559361 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
PSEN1-224ENST00000559361 Q0VG73 95 aa11.34□□□□□ -0.59
PSEN1-224ENST00000559361 C20orf203Q8NBC4 194 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms