RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 LINC01546A6NGU7 62 aa10.1□□□□□ -0.79
SNRPA1-207ENST00000559309 I3L3M4 83 aa10.1□□□□□ -0.79
SNRPA1-207ENST00000559309 VCYO14598 125 aa10.1□□□□□ -0.79
SNRPA1-207ENST00000559309 ESDP10768 282 aa10.1□□□□□ -0.79
SNRPA1-207ENST00000559309 FABP9Q0Z7S8 132 aa10.1□□□□□ -0.79
SNRPA1-207ENST00000559309 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
SNRPA1-207ENST00000559309 WFDC10BQ8IUB3 73 aa10.08□□□□□ -0.8
SNRPA1-207ENST00000559309 CHCHD7Q9BUK0 85 aa10.08□□□□□ -0.8
SNRPA1-207ENST00000559309 COTL1Q14019 142 aa10.07□□□□□ -0.8
SNRPA1-207ENST00000559309 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-207ENST00000559309 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 K7EMI3 77 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 TRGC2P03986 189 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 NIT1Q86X76 327 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 Q8N8P6 123 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 Q9H8V8 135 aa10.06□□□□□ -0.8
SNRPA1-207ENST00000559309 DNAH17Q9UFH2 4485 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 TRBV25-1A0A075B6N4 114 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 TCAPO15273 167 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 SIVA1O15304 175 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 PMCHP20382 165 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 Q6ZR54 194 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 DNAH10Q8IVF4 4471 aa10.05□□□□□ -0.8
SNRPA1-207ENST00000559309 FRAS1Q86XX4 4008 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 H7C423 109 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 K7EP13 123 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 KRTAP1-5Q9BYS1 174 aa10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-207ENST00000559309 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
SNRPA1-207ENST00000559309 LY6G6CO95867 125 aa10.03□□□□□ -0.8
SNRPA1-207ENST00000559309 IFI27P40305 119 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-207ENST00000559309 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
SNRPA1-207ENST00000559309 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
SNRPA1-207ENST00000559309 AMTP48728 403 aa10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 Q0VG73 95 aa10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 Q8N3U1 123 aa10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 DEFB104AQ8WTQ1 72 aa10.02□□□□□ -0.81
SNRPA1-207ENST00000559309 FAT2Q9NYQ8 4349 aa10.01□□□□□ -0.81
SNRPA1-207ENST00000559309 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
SNRPA1-207ENST00000559309 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
SNRPA1-207ENST00000559309 PKIAP61925 76 aa10.01□□□□□ -0.81
SNRPA1-207ENST00000559309 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
SNRPA1-207ENST00000559309 MPV17L2Q567V2 206 aa10□□□□□ -0.81
SNRPA1-207ENST00000559309 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
SNRPA1-207ENST00000559309 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SNRPA1-207ENST00000559309 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-207ENST00000559309 LINC00310P59036 64 aa9.99□□□□□ -0.81
SNRPA1-207ENST00000559309 RBX1P62877 108 aa9.99□□□□□ -0.81
SNRPA1-207ENST00000559309 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
SNRPA1-207ENST00000559309 CHCHD5Q9BSY4 110 aa9.99□□□□□ -0.81
SNRPA1-207ENST00000559309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 A0A096LNJ9 63 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 FCER1GP30273 86 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 LAGE3Q14657 143 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
SNRPA1-207ENST00000559309 LINC00614P0C842 121 aa9.97□□□□□ -0.81
SNRPA1-207ENST00000559309 FGF6P10767 208 aa9.97□□□□□ -0.81
SNRPA1-207ENST00000559309 GAGE6Q13070 117 aa9.97□□□□□ -0.81
SNRPA1-207ENST00000559309 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
SNRPA1-207ENST00000559309 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
SNRPA1-207ENST00000559309 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 RPL39P62891 51 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 TTC32Q5I0X7 151 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 Q8N976 141 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 KRTAP17-1Q9BYP8 105 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 HERC2O95714 4834 aa9.96□□□□□ -0.82
SNRPA1-207ENST00000559309 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 NPSP0C0P6 89 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 CHCHD1Q96BP2 118 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 AP5S1Q9NUS5 200 aa9.95□□□□□ -0.82
SNRPA1-207ENST00000559309 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms