RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 IGHV1-24A0A0C4DH33 117 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
TPM1-217ENST00000559108 I3L3M4 83 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 ESDP10768 282 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 S100PP25815 95 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 ORMDL3Q8N138 153 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
TPM1-217ENST00000559108 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 TRBV25-1A0A075B6N4 114 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 IBA57-AS1B1ANH7 110 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 AMTP48728 403 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 RBX1P62877 108 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 COTL1Q14019 142 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 C6orf223Q8N319 242 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
TPM1-217ENST00000559108 EPPK1P58107 5090 aaKnown RBP7.3□□□□□ -1.24
TPM1-217ENST00000559108 PKD1P98161 4303 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 HLA-DQA1P01909 254 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 APCSP02743 223 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 PPBPP02775 128 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 PMCHP20382 165 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 RPL32P62910 135 aaKnown RBP7.29□□□□□ -1.24
TPM1-217ENST00000559108 TNP2Q05952 138 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 C1orf134Q5TEV5 83 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 ENHOQ6UWT2 76 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 C20orf78Q9BR46 151 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
TPM1-217ENST00000559108 KLK12Q9UKR0 248 aa7.29□□□□□ -1.24
TPM1-217ENST00000559108 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 VCYO14598 125 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 TCAPO15273 167 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 CLPSL2Q6UWE3 100 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 MAPKAPK5-AS1Q8N8E1 139 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
TPM1-217ENST00000559108 Q9HAA7 133 aa7.28□□□□□ -1.24
TPM1-217ENST00000559108 TMEM262E9PQX1 116 aa7.27□□□□□ -1.25
TPM1-217ENST00000559108 PHOX2AO14813 284 aa7.27□□□□□ -1.25
TPM1-217ENST00000559108 URB1-AS1Q96HZ7 61 aa7.27□□□□□ -1.25
TPM1-217ENST00000559108 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
TPM1-217ENST00000559108 A0A087WX48 190 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 COLCA2A8K830 154 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 ATP6V1G1O75348 118 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 PPP1R17O96001 155 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 FGF6P10767 208 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 RPL39P62891 51 aaKnown RBP7.26□□□□□ -1.25
TPM1-217ENST00000559108 FABP9Q0Z7S8 132 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 WFDC2Q14508 124 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
TPM1-217ENST00000559108 MT-ND6P03923 174 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 IFI27P40305 119 aaPredicted RBP7.25□□□□□ -1.25
TPM1-217ENST00000559108 LAGE3Q14657 143 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 LINC00269Q8N2A0 174 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.25□□□□□ -1.25
TPM1-217ENST00000559108 UBE2WQ96B02 151 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 HECTD4Q9Y4D8 3996 aa7.25□□□□□ -1.25
TPM1-217ENST00000559108 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 PRSS29PA6NIE9 313 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 K7EP13 123 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 ANGP03950 147 aaKnown RBP7.24□□□□□ -1.25
TPM1-217ENST00000559108 FCER1GP30273 86 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 FUSP35637 526 aaKnown RBP eCLIP7.24□□□□□ -1.25
TPM1-217ENST00000559108 COX19Q49B96 90 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 C10orf126Q8N4M7 172 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 Q8N8P6 123 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 OPRPNQ99935 248 aaPredicted RBP7.24□□□□□ -1.25
TPM1-217ENST00000559108 MAP1LC3AQ9H492 121 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 UBE2D4Q9Y2X8 147 aa7.24□□□□□ -1.25
TPM1-217ENST00000559108 TRAV9-2A0A087WT02 112 aa7.23□□□□□ -1.25
TPM1-217ENST00000559108 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
TPM1-217ENST00000559108 Q6ZUT4 128 aa7.23□□□□□ -1.25
TPM1-217ENST00000559108 MRPL52Q86TS9 123 aaKnown RBP7.23□□□□□ -1.25
TPM1-217ENST00000559108 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
TPM1-217ENST00000559108 KIR2DL4Q99706 377 aa7.23□□□□□ -1.25
TPM1-217ENST00000559108 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 LRCOL1A6NCL2 159 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 H7C423 109 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 UBE2L6O14933 153 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 REG3AQ06141 175 aa7.22□□□□□ -1.25
TPM1-217ENST00000559108 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
TPM1-217ENST00000559108 A0A096LNJ9 63 aa7.21□□□□□ -1.26
TPM1-217ENST00000559108 TRGC2P03986 189 aa7.21□□□□□ -1.26
TPM1-217ENST00000559108 BTF3P20290 206 aaKnown RBP7.21□□□□□ -1.26
TPM1-217ENST00000559108 KRTAP10-2P60368 255 aa7.21□□□□□ -1.26
TPM1-217ENST00000559108 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
TPM1-217ENST00000559108 A0A087WTM6 91 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms