RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 AP1S3Q96PC3 154 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 MS4A6AQ9H2W1 248 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 UQCR10Q9UDW1 63 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 TP53TG3Q9ULZ0 132 aa3.57□□□□□ -1.84
CASC4-207ENST00000559037 IGKV3-7A0A075B6H7 116 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 TRAV8-2A0A0B4J237 113 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 D6R8Y8 96 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 K7EQG2 157 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 M0R143 59 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 SOCS3O14543 225 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 CRXO43186 299 aaPredicted RBP3.56□□□□□ -1.84
CASC4-207ENST00000559037 SNAI2O43623 268 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 HBDP02042 147 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 GIG44P09565 113 aaPredicted RBP3.56□□□□□ -1.84
CASC4-207ENST00000559037 C3orf79P0CE67 100 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 SMIM17P0DL12 118 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 TFPI2P48307 235 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 CRIP1P50238 77 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 DEFB135Q30KP9 77 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 GDF5OSQ5U4N7 250 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 FAM159AQ6UWV7 190 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 ZNF705AQ6ZN79 300 aaPredicted RBP3.56□□□□□ -1.84
CASC4-207ENST00000559037 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 DCANP1Q8TF63 244 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 MIEN1Q9BRT3 115 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 CBY1Q9Y3M2 126 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
CASC4-207ENST00000559037 RYR2Q92736 4967 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 TRAV9-2A0A087WT02 112 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 IGHV1-24A0A0C4DH33 117 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 SYS1-DBNDD2H3BUS1 97 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 TCAPO15273 167 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 NUPR1O60356 82 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 ATP5LO75964 103 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 HLA-DMBP28068 263 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 DEFB131AP59861 70 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 ERCC8Q13216 396 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 MRPL51Q4U2R6 128 aaKnown RBP3.55□□□□□ -1.84
CASC4-207ENST00000559037 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 ORMDL2Q53FV1 153 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 FOXI2Q6ZQN5 318 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 SPATA12Q7Z6I5 190 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 CSNK1G2-AS1Q8NCQ2 148 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 LYSTQ99698 3801 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 PMCHL2Q9BQD1 86 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 PRO1933Q9H354 126 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 DPH3P1Q9H4G8 78 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 ST20Q9HBF5 79 aa3.55□□□□□ -1.84
CASC4-207ENST00000559037 PLECQ15149 4684 aaKnown RBP3.55□□□□□ -1.84
CASC4-207ENST00000559037 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 C7orf71A4D174 169 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 KLLNB2CW77 178 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 M0R381 172 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 CDKN1BP46527 198 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
CASC4-207ENST00000559037 HNRNPA3P51991 378 aaKnown RBP3.54□□□□□ -1.84
CASC4-207ENST00000559037 CEMP1Q6PRD7 247 aaPredicted RBP3.54□□□□□ -1.84
CASC4-207ENST00000559037 AMN1Q8IY45 258 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 ZFAND2AQ8N6M9 145 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 OR11H2Q8NH07 326 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 FAM19A4Q96LR4 140 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 C20orf78Q9BR46 151 aa3.54□□□□□ -1.84
CASC4-207ENST00000559037 A0A0J9YX75 114 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 NUPR2A6NF83 97 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 KNCNA6PVL3 124 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 H3BVH4 76 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 H7C1H1 209 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 ZNF688P0C7X2 276 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 RNASE4P34096 147 aaKnown RBP3.53□□□□□ -1.84
CASC4-207ENST00000559037 IFI27P40305 119 aaPredicted RBP3.53□□□□□ -1.84
CASC4-207ENST00000559037 LGALS9BQ3B8N2 356 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 TDRG1Q3Y452 100 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 LINC01545Q5VT33 79 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 LGALS9CQ6DKI2 356 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 MORN3Q6PF18 240 aaPredicted RBP3.53□□□□□ -1.84
CASC4-207ENST00000559037 Q6ZN92 141 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 STHQ8IWL8 128 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 Q8N8P6 123 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 C14orf144Q96I85 54 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 C2orf88Q9BSF0 95 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 C11orf68Q9H3H3 251 aaKnown RBP3.53□□□□□ -1.84
CASC4-207ENST00000559037 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
CASC4-207ENST00000559037 ALMS1Q8TCU4 4167 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 LOC389332A0A1B0GUA5 103 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 H3BMM0 161 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 CDK2AP2O75956 126 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 NXPH4O95158 308 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 RBMY1A1P0DJD3 496 aaKnown RBP3.52□□□□□ -1.85
CASC4-207ENST00000559037 RBMY1CP0DJD4 496 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
CASC4-207ENST00000559037 FCER1GP30273 86 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms