RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 LINC01551Q86U37 167 aa14.08□□□□□ -0.16
CRNDE-205ENST00000558952 INAFM2P0DMQ5 153 aa14.07□□□□□ -0.16
CRNDE-205ENST00000558952 REG3AQ06141 175 aa14.07□□□□□ -0.16
CRNDE-205ENST00000558952 LINC01620Q4KN68 170 aa14.07□□□□□ -0.16
CRNDE-205ENST00000558952 DEFB104AQ8WTQ1 72 aa14.07□□□□□ -0.16
CRNDE-205ENST00000558952 A0A1B0GUV1 79 aa14.06□□□□□ -0.16
CRNDE-205ENST00000558952 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
CRNDE-205ENST00000558952 USP17L23D6RBM5 183 aa14.05□□□□□ -0.16
CRNDE-205ENST00000558952 Q6ZSA8 131 aa14.05□□□□□ -0.16
CRNDE-205ENST00000558952 TSKUQ8WUA8 353 aa14.05□□□□□ -0.16
CRNDE-205ENST00000558952 GFRA4Q9GZZ7 299 aa14.05□□□□□ -0.16
CRNDE-205ENST00000558952 OSTCQ9NRP0 149 aa14.05□□□□□ -0.16
CRNDE-205ENST00000558952 C20orf203Q8NBC4 194 aa14.04□□□□□ -0.16
CRNDE-205ENST00000558952 RPL39LQ96EH5 51 aaKnown RBP14.04□□□□□ -0.16
CRNDE-205ENST00000558952 IGLV10-54A0A075B6I4 117 aa14.03□□□□□ -0.16
CRNDE-205ENST00000558952 TRAV8-4A0A0B4J246 113 aa14.03□□□□□ -0.16
CRNDE-205ENST00000558952 A0A1B0GUT8 65 aa14.03□□□□□ -0.16
CRNDE-205ENST00000558952 HIGD1CA8MV81 97 aa14.03□□□□□ -0.16
CRNDE-205ENST00000558952 FAM74A3Q4VXF1 159 aa14.03□□□□□ -0.16
CRNDE-205ENST00000558952 IGLV4-60A0A075B6I1 120 aa14.02□□□□□ -0.17
CRNDE-205ENST00000558952 FAM231BA6NCW3 169 aa14.02□□□□□ -0.17
CRNDE-205ENST00000558952 NCR2O95944 276 aa14.02□□□□□ -0.17
CRNDE-205ENST00000558952 TMEM241Q24JQ0 296 aa14.01□□□□□ -0.17
CRNDE-205ENST00000558952 SDHAF1A6NFY7 115 aa14□□□□□ -0.17
CRNDE-205ENST00000558952 APCSP02743 223 aa14□□□□□ -0.17
CRNDE-205ENST00000558952 AMMECR1LQ6DCA0 310 aa14□□□□□ -0.17
CRNDE-205ENST00000558952 FAT1Q14517 4588 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 PEA15Q15121 130 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 KRTAP26-1Q6PEX3 210 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 ISOC2Q96AB3 205 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 TMEM191AQ9H0A3 160 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 DNAH8Q96JB1 4490 aa13.99□□□□□ -0.17
CRNDE-205ENST00000558952 PRSS1P07477 247 aa13.98□□□□□ -0.17
CRNDE-205ENST00000558952 PMCHP20382 165 aa13.98□□□□□ -0.17
CRNDE-205ENST00000558952 ADIRFQ15847 76 aa13.98□□□□□ -0.17
CRNDE-205ENST00000558952 DGAT2L7PQ6IED9 249 aa13.98□□□□□ -0.17
CRNDE-205ENST00000558952 V9GYV3 84 aa13.98□□□□□ -0.17
CRNDE-205ENST00000558952 H7C423 109 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 I3L3M4 83 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 RPL23P62829 140 aaKnown RBP13.97□□□□□ -0.17
CRNDE-205ENST00000558952 RIGQ13278 110 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
CRNDE-205ENST00000558952 SCXQ7RTU7 201 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 CLRN3Q8NCR9 226 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 ST20Q9HBF5 79 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 NAT8Q9UHE5 227 aa13.97□□□□□ -0.17
CRNDE-205ENST00000558952 TRBV6-5A0A0K0K1A5 114 aa13.96□□□□□ -0.17
CRNDE-205ENST00000558952 PLA2G1BP04054 148 aaKnown RBP13.96□□□□□ -0.17
CRNDE-205ENST00000558952 LINC00528Q8N1L1 170 aa13.96□□□□□ -0.17
CRNDE-205ENST00000558952 CHAC1Q9BUX1 264 aa13.96□□□□□ -0.17
CRNDE-205ENST00000558952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.95□□□□□ -0.18
CRNDE-205ENST00000558952 IGKV2-29A2NJV5 120 aaPredicted RBP13.95□□□□□ -0.18
CRNDE-205ENST00000558952 NUP35Q8NFH5 326 aa13.95□□□□□ -0.18
CRNDE-205ENST00000558952 MRAP2Q96G30 205 aa13.95□□□□□ -0.18
CRNDE-205ENST00000558952 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
CRNDE-205ENST00000558952 NAT8BQ9UHF3 227 aa13.95□□□□□ -0.18
CRNDE-205ENST00000558952 IGKV3OR2-268A0A0C4DH90 116 aa13.94□□□□□ -0.18
CRNDE-205ENST00000558952 RAB4AP20338 218 aa13.94□□□□□ -0.18
CRNDE-205ENST00000558952 hDV102S1A0JD36 115 aa13.93□□□□□ -0.18
CRNDE-205ENST00000558952 C9JQL5 133 aa13.93□□□□□ -0.18
CRNDE-205ENST00000558952 AMN1Q8IY45 258 aa13.93□□□□□ -0.18
CRNDE-205ENST00000558952 RNF185Q96GF1 192 aa13.93□□□□□ -0.18
CRNDE-205ENST00000558952 FGF6P10767 208 aa13.92□□□□□ -0.18
CRNDE-205ENST00000558952 SRSF3P84103 164 aaKnown RBP13.92□□□□□ -0.18
CRNDE-205ENST00000558952 C9orf163Q8N9P6 203 aa13.92□□□□□ -0.18
CRNDE-205ENST00000558952 TMEM101Q96IK0 257 aa13.92□□□□□ -0.18
CRNDE-205ENST00000558952 BTF3L4Q96K17 158 aa13.92□□□□□ -0.18
CRNDE-205ENST00000558952 AP5S1Q9NUS5 200 aa13.92□□□□□ -0.18
CRNDE-205ENST00000558952 GAS8-AS1O95177 125 aa13.91□□□□□ -0.18
CRNDE-205ENST00000558952 ZNF25P17030 456 aaPredicted RBP13.91□□□□□ -0.18
CRNDE-205ENST00000558952 CIRBP-AS1Q8TBR5 109 aa13.91□□□□□ -0.18
CRNDE-205ENST00000558952 TMEM242Q9NWH2 141 aa13.91□□□□□ -0.18
CRNDE-205ENST00000558952 VPS13BQ7Z7G8 4022 aa13.9□□□□□ -0.18
CRNDE-205ENST00000558952 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
CRNDE-205ENST00000558952 PPP1R17O96001 155 aa13.89□□□□□ -0.19
CRNDE-205ENST00000558952 TSHBP01222 138 aa13.89□□□□□ -0.19
CRNDE-205ENST00000558952 RPS10P46783 165 aaKnown RBP13.89□□□□□ -0.19
CRNDE-205ENST00000558952 CFAP161Q6P656 301 aa13.89□□□□□ -0.19
CRNDE-205ENST00000558952 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.88□□□□□ -0.19
CRNDE-205ENST00000558952 SMIM27A0A1W2PRY6 76 aa13.88□□□□□ -0.19
CRNDE-205ENST00000558952 POLR2KP53803 58 aaKnown RBP13.88□□□□□ -0.19
CRNDE-205ENST00000558952 CNBPP62633 177 aaKnown RBP13.88□□□□□ -0.19
CRNDE-205ENST00000558952 TRBV27A0A0K0K1C4 114 aa13.87□□□□□ -0.19
CRNDE-205ENST00000558952 SMKR1H3BMG3 65 aa13.87□□□□□ -0.19
CRNDE-205ENST00000558952 ESDP10768 282 aa13.87□□□□□ -0.19
CRNDE-205ENST00000558952 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
CRNDE-205ENST00000558952 CHCHD10Q8WYQ3 142 aaPredicted RBP13.87□□□□□ -0.19
CRNDE-205ENST00000558952 A0A1B0GW15 77 aa13.86□□□□□ -0.19
CRNDE-205ENST00000558952 VCYO14598 125 aa13.86□□□□□ -0.19
CRNDE-205ENST00000558952 FCER1GP30273 86 aa13.86□□□□□ -0.19
CRNDE-205ENST00000558952 CAMPP49913 170 aa13.86□□□□□ -0.19
CRNDE-205ENST00000558952 C7orf77A4D0Y5 90 aa13.85□□□□□ -0.19
CRNDE-205ENST00000558952 SUMO2P61956 95 aaKnown RBP13.84□□□□□ -0.19
CRNDE-205ENST00000558952 FAM104BQ5XKR9 115 aa13.84□□□□□ -0.19
CRNDE-205ENST00000558952 IGHV3-64A0A075B6Q5 118 aa13.83□□□□□ -0.2
CRNDE-205ENST00000558952 PPP1R2P9O14990 202 aa13.83□□□□□ -0.2
CRNDE-205ENST00000558952 S100A8P05109 93 aa13.83□□□□□ -0.2
CRNDE-205ENST00000558952 NRACQ8N912 160 aa13.83□□□□□ -0.2
CRNDE-205ENST00000558952 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
CRNDE-205ENST00000558952 SMAGPQ0VAQ4 97 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms