RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
SMAD6-203ENST00000558937 GTSF1Q8WW33 167 aa9.78□□□□□ -0.84
SMAD6-203ENST00000558937 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
SMAD6-203ENST00000558937 AMTP48728 403 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 COTL1Q14019 142 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 MYCBP2O75592 4640 aa9.77□□□□□ -0.85
SMAD6-203ENST00000558937 UBE2L6O14933 153 aa9.76□□□□□ -0.85
SMAD6-203ENST00000558937 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
SMAD6-203ENST00000558937 FAM231DQ6ZW35 169 aa9.76□□□□□ -0.85
SMAD6-203ENST00000558937 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
SMAD6-203ENST00000558937 CEBPGP53567 150 aa9.75□□□□□ -0.85
SMAD6-203ENST00000558937 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
SMAD6-203ENST00000558937 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
SMAD6-203ENST00000558937 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
SMAD6-203ENST00000558937 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
SMAD6-203ENST00000558937 HERC1Q15751 4861 aa9.74□□□□□ -0.85
SMAD6-203ENST00000558937 J3QL48 77 aa9.74□□□□□ -0.85
SMAD6-203ENST00000558937 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
SMAD6-203ENST00000558937 A8MWL6 223 aa9.73□□□□□ -0.85
SMAD6-203ENST00000558937 CLRN3Q8NCR9 226 aa9.73□□□□□ -0.85
SMAD6-203ENST00000558937 CT83Q5H943 113 aa9.72□□□□□ -0.85
SMAD6-203ENST00000558937 SMIM7Q9BQ49 75 aa9.72□□□□□ -0.85
SMAD6-203ENST00000558937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
SMAD6-203ENST00000558937 hDV102S1A0JD36 115 aa9.71□□□□□ -0.86
SMAD6-203ENST00000558937 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.86
SMAD6-203ENST00000558937 NCR2O95944 276 aa9.71□□□□□ -0.86
SMAD6-203ENST00000558937 APCSP02743 223 aa9.71□□□□□ -0.86
SMAD6-203ENST00000558937 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
SMAD6-203ENST00000558937 EIF5A2Q9GZV4 153 aaKnown RBP9.71□□□□□ -0.86
SMAD6-203ENST00000558937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
SMAD6-203ENST00000558937 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
SMAD6-203ENST00000558937 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
SMAD6-203ENST00000558937 KRTAP29-1A8MX34 341 aaPredicted RBP9.7□□□□□ -0.86
SMAD6-203ENST00000558937 PANO1I0J062 215 aa9.7□□□□□ -0.86
SMAD6-203ENST00000558937 NDUFS6O75380 124 aaKnown RBP9.7□□□□□ -0.86
SMAD6-203ENST00000558937 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
SMAD6-203ENST00000558937 LINC01551Q86U37 167 aa9.7□□□□□ -0.86
SMAD6-203ENST00000558937 FAM210AQ96ND0 272 aa9.7□□□□□ -0.86
SMAD6-203ENST00000558937 GAGE12HA6NDE8 117 aa9.69□□□□□ -0.86
SMAD6-203ENST00000558937 SRP19P09132 144 aaKnown RBP9.69□□□□□ -0.86
SMAD6-203ENST00000558937 AMMECR1LQ6DCA0 310 aa9.69□□□□□ -0.86
SMAD6-203ENST00000558937 SDIM1Q6ZPB5 146 aa9.69□□□□□ -0.86
SMAD6-203ENST00000558937 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
SMAD6-203ENST00000558937 AP5S1Q9NUS5 200 aa9.69□□□□□ -0.86
SMAD6-203ENST00000558937 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 SLPIP03973 132 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 RPL37AP61513 92 aaKnown RBP9.68□□□□□ -0.86
SMAD6-203ENST00000558937 RNASEKQ6P5S7 137 aaKnown RBP9.68□□□□□ -0.86
SMAD6-203ENST00000558937 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
SMAD6-203ENST00000558937 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
SMAD6-203ENST00000558937 H7C423 109 aa9.67□□□□□ -0.86
SMAD6-203ENST00000558937 FGF6P10767 208 aa9.67□□□□□ -0.86
SMAD6-203ENST00000558937 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
SMAD6-203ENST00000558937 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.66□□□□□ -0.86
SMAD6-203ENST00000558937 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 I3L3M4 83 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 PMCHP20382 165 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
SMAD6-203ENST00000558937 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
SMAD6-203ENST00000558937 IGHV3-64A0A075B6Q5 118 aa9.65□□□□□ -0.86
SMAD6-203ENST00000558937 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
SMAD6-203ENST00000558937 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
SMAD6-203ENST00000558937 ST20Q9HBF5 79 aa9.65□□□□□ -0.86
SMAD6-203ENST00000558937 TSHBP01222 138 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 CHTF8P0CG12 524 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 ESDP10768 282 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 ZNF25P17030 456 aaPredicted RBP9.64□□□□□ -0.87
SMAD6-203ENST00000558937 RPS10P46783 165 aaKnown RBP9.64□□□□□ -0.87
SMAD6-203ENST00000558937 HIGD2BQ4VC39 106 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 CFAP161Q6P656 301 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 V9GYV3 84 aa9.64□□□□□ -0.87
SMAD6-203ENST00000558937 RAB4AP20338 218 aa9.63□□□□□ -0.87
SMAD6-203ENST00000558937 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
SMAD6-203ENST00000558937 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
SMAD6-203ENST00000558937 MRAP2Q96G30 205 aa9.63□□□□□ -0.87
SMAD6-203ENST00000558937 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
SMAD6-203ENST00000558937 RIGQ13278 110 aa9.62□□□□□ -0.87
SMAD6-203ENST00000558937 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
SMAD6-203ENST00000558937 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
SMAD6-203ENST00000558937 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
SMAD6-203ENST00000558937 BTF3L4Q96K17 158 aa9.62□□□□□ -0.87
SMAD6-203ENST00000558937 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 OXTP01178 125 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 RPL23P62829 140 aaKnown RBP9.61□□□□□ -0.87
SMAD6-203ENST00000558937 FOXI1Q12951 378 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 TMEM241Q24JQ0 296 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
SMAD6-203ENST00000558937 A0A087WYN8 130 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms