RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZNF609O15014 1411 aa0.4□□□□□ -2.34
CASC4-206ENST00000558847 MBD5Q9P267 1494 aa0.4□□□□□ -2.35
CASC4-206ENST00000558847 ARFGEF1Q9Y6D6 1849 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 ZNF815PA8K554 130 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 MIF4GDA9UHW6 222 aaKnown RBP0.39□□□□□ -2.35
CASC4-206ENST00000558847 SSSCA1O60232 199 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 SPAG11BQ08648 103 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 SPAG11AQ6PDA7 123 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 SSBP3-AS1Q7Z2R9 100 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 PP6455Q8WZ26 134 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 CNFNQ9BYD5 112 aa0.39□□□□□ -2.35
CASC4-206ENST00000558847 MYH9P35579 1960 aaKnown RBP0.39□□□□□ -2.35
CASC4-206ENST00000558847 POLQO75417 2590 aa0.38□□□□□ -2.35
CASC4-206ENST00000558847 ROCK2O75116 1388 aaKnown RBP0.38□□□□□ -2.35
CASC4-206ENST00000558847 KTN1Q86UP2 1357 aaKnown RBP0.38□□□□□ -2.35
CASC4-206ENST00000558847 CATR1Q13166 79 aa0.38□□□□□ -2.35
CASC4-206ENST00000558847 NPVFQ9HCQ7 196 aa0.38□□□□□ -2.35
CASC4-206ENST00000558847 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
CASC4-206ENST00000558847 M0R135 149 aa0.37□□□□□ -2.35
CASC4-206ENST00000558847 S100A3P33764 101 aa0.37□□□□□ -2.35
CASC4-206ENST00000558847 COX17Q14061 63 aa0.37□□□□□ -2.35
CASC4-206ENST00000558847 V9GYH0 126 aa0.37□□□□□ -2.35
CASC4-206ENST00000558847 CTXND1A0A1B0GTU2 59 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 TNFP01375 233 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 C5orf38Q86SI9 138 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 MGST2Q99735 147 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 SCN3BQ9NY72 215 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 F8P00451 2351 aa0.36□□□□□ -2.35
CASC4-206ENST00000558847 CPSF1Q10570 1443 aaKnown RBP0.36□□□□□ -2.35
CASC4-206ENST00000558847 MRC1P22897 1456 aa0.35□□□□□ -2.35
CASC4-206ENST00000558847 LOC100130705A0A1B0GUX0 176 aa0.35□□□□□ -2.35
CASC4-206ENST00000558847 IFT172Q9UG01 1749 aa0.35□□□□□ -2.35
CASC4-206ENST00000558847 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
CASC4-206ENST00000558847 LOC285095A0A1B0GVY8 99 aa0.34□□□□□ -2.36
CASC4-206ENST00000558847 PHLPP1O60346 1717 aa0.34□□□□□ -2.36
CASC4-206ENST00000558847 MRPL54Q6P161 138 aaKnown RBP0.34□□□□□ -2.36
CASC4-206ENST00000558847 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
CASC4-206ENST00000558847 DYNLRB1Q9NP97 96 aa0.34□□□□□ -2.36
CASC4-206ENST00000558847 A2ML1A8K2U0 1454 aa0.34□□□□□ -2.36
CASC4-206ENST00000558847 TRBV7-3A0A075B6L6 115 aa0.33□□□□□ -2.36
CASC4-206ENST00000558847 DLEU1O43261 78 aa0.33□□□□□ -2.36
CASC4-206ENST00000558847 TPPP2P59282 170 aa0.33□□□□□ -2.36
CASC4-206ENST00000558847 MYOZ3Q8TDC0 251 aa0.33□□□□□ -2.36
CASC4-206ENST00000558847 ARAP2Q8WZ64 1704 aa0.33□□□□□ -2.36
CASC4-206ENST00000558847 UQCR11O14957 56 aa0.32□□□□□ -2.36
CASC4-206ENST00000558847 APOC3P02656 99 aa0.32□□□□□ -2.36
CASC4-206ENST00000558847 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
CASC4-206ENST00000558847 SPCS1Q9Y6A9 102 aa0.32□□□□□ -2.36
CASC4-206ENST00000558847 IGF2RP11717 2491 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 SMG6Q86US8 1419 aaKnown RBP0.31□□□□□ -2.36
CASC4-206ENST00000558847 PI4KAP42356 2102 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 MYH7P12883 1935 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 BAGE2Q86Y30 109 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 AMELXQ99217 191 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 IER3IP1Q9Y5U9 82 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 U3KQA8 63 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 FOCADQ5VW36 1801 aa0.31□□□□□ -2.36
CASC4-206ENST00000558847 PRDM2Q13029 1718 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 F8VRH5 84 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 SNAPC5O75971 98 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 TMEM170BQ5T4T1 132 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 C9orf153Q5TBE3 101 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 TMEM203Q969S6 136 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 PRO0255Q9UI72 69 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 FAM208BQ5VWN6 2430 aa0.3□□□□□ -2.36
CASC4-206ENST00000558847 ASXL3Q9C0F0 2248 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 UBE2L5PA0A1B0GUS4 154 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 FAM24AA6NFZ4 105 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 ATP5EP56381 51 aaPredicted RBP0.29□□□□□ -2.36
CASC4-206ENST00000558847 UBE2L3P68036 154 aaKnown RBP0.29□□□□□ -2.36
CASC4-206ENST00000558847 LRRC37A2A6NM11 1700 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 MAST4O15021 2626 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 PATJQ8NI35 1801 aa0.29□□□□□ -2.36
CASC4-206ENST00000558847 A0A1B0GV90 55 aa0.28□□□□□ -2.36
CASC4-206ENST00000558847 GNG4P50150 75 aa0.28□□□□□ -2.36
CASC4-206ENST00000558847 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.37
CASC4-206ENST00000558847 NALCNQ8IZF0 1738 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
CASC4-206ENST00000558847 MYH8P13535 1937 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 TRAV22A0A0B4J277 110 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 OOSP1A8MZH6 123 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 IFITM1P13164 125 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 HAMPP81172 84 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 MRPS10P82664 201 aaKnown RBP0.27□□□□□ -2.37
CASC4-206ENST00000558847 WDR7Q9Y4E6 1490 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
CASC4-206ENST00000558847 CACNA1CQ13936 2221 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 CORTO00230 105 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 HMGN4O00479 90 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 C2orf88Q9BSF0 95 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 UQCR10Q9UDW1 63 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 LINC01558Q9Y6Z2 57 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 MYOM2P54296 1465 aa0.26□□□□□ -2.37
CASC4-206ENST00000558847 KMT2DO14686 5537 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 IGSF10Q6WRI0 2623 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 SPTBN2O15020 2390 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 EIF4G3O43432 1585 aaKnown RBP0.25□□□□□ -2.37
CASC4-206ENST00000558847 IGLC7A0M8Q6 106 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms