RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.33□□□□□ -1.88
LRRC28-208ENST00000558771 SUN5Q8TC36 379 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 SCGB1C1Q8TD33 95 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 DERL1Q9BUN8 251 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 SMIM3Q9BZL3 60 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 GFRA4Q9GZZ7 299 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 NUDT15Q9NV35 164 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 HSPB11Q9Y547 144 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 ARL2-SNX15V9GYD0 113 aa3.33□□□□□ -1.88
LRRC28-208ENST00000558771 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 SH2D1AO60880 128 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 IFNA7P01567 189 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 MT3P25713 68 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 GCHFRP30047 84 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 CDC34P49427 236 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-208ENST00000558771 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-208ENST00000558771 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
LRRC28-208ENST00000558771 IQCJQ1A5X6 159 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 Q86TA4 180 aa3.32□□□□□ -1.88
LRRC28-208ENST00000558771 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 TRAV26-2A0A0B4J265 109 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 IGHV1-24A0A0C4DH33 117 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 CCDC160A6NGH7 325 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 CTAG1AP78358 180 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 PRR4Q16378 134 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 ZNF664Q8N3J9 261 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 INO80EQ8NBZ0 244 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-208ENST00000558771 WFDC1Q9HC57 220 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
LRRC28-208ENST00000558771 PEX7O00628 323 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 RPL12P30050 165 aaKnown RBP3.3□□□□□ -1.88
LRRC28-208ENST00000558771 CACNG7P62955 275 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 ZNF674Q2M3X9 581 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 FAM162BQ5T6X4 162 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 OR10AG1Q8NH19 301 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 PPP1R1CQ8WVI7 109 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 AQP10Q96PS8 301 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 TMEM167BQ9NRX6 74 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 LINC00474Q9P2X8 69 aa3.3□□□□□ -1.88
LRRC28-208ENST00000558771 GVQW2A0A096LPI5 108 aaPredicted RBP3.29□□□□□ -1.88
LRRC28-208ENST00000558771 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 MUC21A0A140T8X8 626 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 FAM240BA0A1B0GVZ2 78 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 A0A1W2PRE2 83 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 CXorf1O96002 111 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 SULT1A2P50226 295 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 DEFA3P59666 94 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 CYCSP99999 105 aaKnown RBP3.29□□□□□ -1.88
LRRC28-208ENST00000558771 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 ZNF471Q9BX82 626 aaPredicted RBP3.29□□□□□ -1.88
LRRC28-208ENST00000558771 ZFP30Q9Y2G7 519 aa3.29□□□□□ -1.88
LRRC28-208ENST00000558771 VCYO14598 125 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 SNAI2O43623 268 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 MPC2O95563 127 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 CAMPP49913 170 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 H2BFSP57053 126 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 UBE2G2P60604 165 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 SSTP61278 116 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 SPANXN1Q5VSR9 72 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 LINC00526Q96FQ7 95 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
LRRC28-208ENST00000558771 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 M0QY20 66 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 UBE2L6O14933 153 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 LTAP01374 205 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 MBP02144 154 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 MT-ND6P03923 174 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 CXCL1P09341 107 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 OR5AL1P0C617 328 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 PET100P0DJ07 73 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 SMIM17P0DL12 118 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 ATP6V0CP27449 155 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 UBE2G1P62253 170 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 C1orf137Q5JT78 98 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
LRRC28-208ENST00000558771 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 FMC1Q96HJ9 113 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 CARD19Q96LW7 228 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 PSMG3Q9BT73 122 aaPredicted RBP3.27□□□□□ -1.89
LRRC28-208ENST00000558771 ACTR3CQ9C0K3 210 aaPredicted RBP3.27□□□□□ -1.89
LRRC28-208ENST00000558771 PKIGQ9Y2B9 76 aa3.27□□□□□ -1.89
LRRC28-208ENST00000558771 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 FAM74A7A6NL05 159 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 MGPP08493 103 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 NKX2-5P52952 324 aaPredicted RBP3.26□□□□□ -1.89
LRRC28-208ENST00000558771 SERF2P84101 59 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 GAGE2BQ13066 116 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 ZNF726P1Q15940 193 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 GAGE2EQ4V326 116 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 GAGE2AQ6NT46 116 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 PHF5AQ7RTV0 110 aaKnown RBP3.26□□□□□ -1.89
LRRC28-208ENST00000558771 FER1L6-AS1Q8NA97 138 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 DIRC1Q969H9 104 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 PGLYRP4Q96LB8 373 aa3.26□□□□□ -1.89
LRRC28-208ENST00000558771 AP1S3Q96PC3 154 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms