RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ASIPP42127 132 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 HAMPP81172 84 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 LYZL1Q6UWQ5 148 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 SPATA12Q7Z6I5 190 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 DAZ4Q86SG3 579 aaKnown RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 Q8NBF4 154 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 GTSF1Q8WW33 167 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 C11orf52Q96A22 123 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 PTH2Q96A98 100 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 ALKBH7Q9BT30 221 aaPredicted RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 NKX6-2Q9C056 277 aaPredicted RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 DAZ3Q9NR90 486 aaKnown RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 HSPG2P98160 4391 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 A0A087WZ39 114 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 TRBV6-4A0A1B0GX49 114 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 EPM2AB3EWF7 344 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 SNAI2O43623 268 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 IGLC6P0CF74 106 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 BCL2P10415 239 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 EVI2AP22794 236 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 SRIP30626 198 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 PPT1P50897 306 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 CEBPGP53567 150 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 EIF5AP63241 154 aaKnown RBP2.8□□□□□ -1.96
SPG11-211ENST00000558561 MEF2BQ02080 365 aaPredicted RBP2.8□□□□□ -1.96
SPG11-211ENST00000558561 SLAQ13239 276 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 LINC00336Q6ZUF6 198 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 OR2D3Q8NGH3 330 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 ATP6V0E2Q8NHE4 81 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 VAX2Q9UIW0 290 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 PHLDA3Q9Y5J5 127 aa2.8□□□□□ -1.96
SPG11-211ENST00000558561 A0A087WTM6 91 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 TRAV26-2A0A0B4J265 109 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 A8MWV9 139 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 LECT2O14960 151 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 S100A9P06702 114 aaKnown RBP2.79□□□□□ -1.96
SPG11-211ENST00000558561 NTF3P20783 257 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 GNG4P50150 75 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 RAB5CP51148 216 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 UBE2D3P61077 147 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 UBE2D2P62837 147 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 LINC01620Q4KN68 170 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 OR10J3Q5JRS4 329 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 PET117Q6UWS5 81 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 TPPP3Q9BW30 176 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 GTSF1LQ9H1H1 148 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 Q9HAA7 133 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 MANBALQ9NQG1 85 aa2.79□□□□□ -1.96
SPG11-211ENST00000558561 C16orf90A8MZG2 172 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 IBA57-AS1B1ANH7 110 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 M0QY20 66 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 OR5AL1P0C617 328 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 IFITM2Q01629 132 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 RHOHQ15669 191 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 LELP1Q5T871 98 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 SPANXN1Q5VSR9 72 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
SPG11-211ENST00000558561 TEX261Q6UWH6 196 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 ENHOQ6UWT2 76 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 ZFP2Q6ZN57 461 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 NIT1Q86X76 327 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 ZFP82Q8N141 532 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 Q8N976 141 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 GATD1Q8NB37 220 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 BAALCQ8WXS3 180 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 RPL39LQ96EH5 51 aaKnown RBP2.78□□□□□ -1.96
SPG11-211ENST00000558561 PGLYRP4Q96LB8 373 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 FAM210AQ96ND0 272 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 PRADC1Q9BSG0 188 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 KLK12Q9UKR0 248 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 LY96Q9Y6Y9 160 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 FAT1Q14517 4588 aa2.78□□□□□ -1.96
SPG11-211ENST00000558561 TRBV7-3A0A075B6L6 115 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 SMKR1H3BMG3 65 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 GATCO43716 136 aaKnown RBP2.77□□□□□ -1.97
SPG11-211ENST00000558561 PDE6DO43924 150 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 IFNA1P01562 189 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 P01737 135 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 SMR3BP02814 79 aaPredicted RBP2.77□□□□□ -1.97
SPG11-211ENST00000558561 MGPP08493 103 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 RAB4BP61018 213 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
SPG11-211ENST00000558561 ZNF56Q15929 161 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 LINC01556Q5JQF7 62 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 SOHLH1Q5JUK2 328 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 KRTAP26-1Q6PEX3 210 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 ATRAIDQ6UW56 229 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 LINC01551Q86U37 167 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 RNF185Q96GF1 192 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 TXNDC17Q9BRA2 123 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 TCEAL7Q9BRU2 100 aa2.77□□□□□ -1.97
SPG11-211ENST00000558561 EIF5A2Q9GZV4 153 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms