RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IGLV4-60A0A075B6I1 120 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
HERC1-202ENST00000558324 PRSS1P07477 247 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 SMIM15Q7Z3B0 74 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
HERC1-202ENST00000558324 GFRA4Q9GZZ7 299 aa7.75□□□□□ -1.17
HERC1-202ENST00000558324 LYPD6BQ8NI32 183 aa7.74□□□□□ -1.17
HERC1-202ENST00000558324 SMIM7Q9BQ49 75 aa7.74□□□□□ -1.17
HERC1-202ENST00000558324 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
HERC1-202ENST00000558324 IGKV3OR2-268A0A0C4DH90 116 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 A0A1B0GVG6 124 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 A8MWL6 223 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 FAM231DQ6ZW35 169 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
HERC1-202ENST00000558324 HERC1Q15751 4861 aa7.72□□□□□ -1.17
HERC1-202ENST00000558324 A0A1B0GUV1 79 aa7.72□□□□□ -1.17
HERC1-202ENST00000558324 ZNF727A8MUV8 499 aa7.72□□□□□ -1.17
HERC1-202ENST00000558324 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
HERC1-202ENST00000558324 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
HERC1-202ENST00000558324 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.71□□□□□ -1.18
HERC1-202ENST00000558324 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
HERC1-202ENST00000558324 IGKV2-29A2NJV5 120 aaPredicted RBP7.71□□□□□ -1.18
HERC1-202ENST00000558324 CT83Q5H943 113 aa7.71□□□□□ -1.18
HERC1-202ENST00000558324 LINC01551Q86U37 167 aa7.71□□□□□ -1.18
HERC1-202ENST00000558324 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
HERC1-202ENST00000558324 TRAV8-4A0A0B4J246 113 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 SDHAF1A6NFY7 115 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 GAS8-AS1O95177 125 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 APCSP02743 223 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
HERC1-202ENST00000558324 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 DGAT2L7PQ6IED9 249 aa7.7□□□□□ -1.18
HERC1-202ENST00000558324 RNASEKQ6P5S7 137 aaKnown RBP7.7□□□□□ -1.18
HERC1-202ENST00000558324 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
HERC1-202ENST00000558324 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
HERC1-202ENST00000558324 J3QL48 77 aa7.69□□□□□ -1.18
HERC1-202ENST00000558324 TEX261Q6UWH6 196 aa7.69□□□□□ -1.18
HERC1-202ENST00000558324 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
HERC1-202ENST00000558324 TSKUQ8WUA8 353 aa7.69□□□□□ -1.18
HERC1-202ENST00000558324 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
HERC1-202ENST00000558324 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
HERC1-202ENST00000558324 NCR2O95944 276 aa7.68□□□□□ -1.18
HERC1-202ENST00000558324 PMCHP20382 165 aa7.68□□□□□ -1.18
HERC1-202ENST00000558324 CLRN3Q8NCR9 226 aa7.68□□□□□ -1.18
HERC1-202ENST00000558324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
HERC1-202ENST00000558324 PANO1I0J062 215 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 I3L3M4 83 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 FGF6P10767 208 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 AMN1Q8IY45 258 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 ST20Q9HBF5 79 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 OSTCQ9NRP0 149 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 TMEM242Q9NWH2 141 aa7.67□□□□□ -1.18
HERC1-202ENST00000558324 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
HERC1-202ENST00000558324 NDUFS6O75380 124 aaKnown RBP7.66□□□□□ -1.18
HERC1-202ENST00000558324 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
HERC1-202ENST00000558324 CNBPP62633 177 aaKnown RBP7.66□□□□□ -1.18
HERC1-202ENST00000558324 ADIRFQ15847 76 aa7.66□□□□□ -1.18
HERC1-202ENST00000558324 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
HERC1-202ENST00000558324 RNF185Q96GF1 192 aa7.66□□□□□ -1.18
HERC1-202ENST00000558324 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
HERC1-202ENST00000558324 V9GYV3 84 aa7.66□□□□□ -1.18
HERC1-202ENST00000558324 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
HERC1-202ENST00000558324 TRBV6-5A0A0K0K1A5 114 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 SMKR1H3BMG3 65 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 TSHBP01222 138 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 SLPIP03973 132 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 RAB4AP20338 218 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.18
HERC1-202ENST00000558324 RPL37AP61513 92 aaKnown RBP7.65□□□□□ -1.18
HERC1-202ENST00000558324 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 C15orf56Q8N910 161 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 ISOC2Q96AB3 205 aa7.65□□□□□ -1.18
HERC1-202ENST00000558324 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 C9JQL5 133 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 H7C423 109 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
HERC1-202ENST00000558324 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
HERC1-202ENST00000558324 RIGQ13278 110 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 NUP35Q8NFH5 326 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 MRAP2Q96G30 205 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 TMEM101Q96IK0 257 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 BTF3L4Q96K17 158 aa7.64□□□□□ -1.19
HERC1-202ENST00000558324 ZNF25P17030 456 aaPredicted RBP7.63□□□□□ -1.19
HERC1-202ENST00000558324 XCL1P47992 114 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 FAM74A3Q4VXF1 159 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
HERC1-202ENST00000558324 ESDP10768 282 aa7.62□□□□□ -1.19
HERC1-202ENST00000558324 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
HERC1-202ENST00000558324 C7orf77A4D0Y5 90 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1216.6 ms