RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SERTM2A0A1B0GWG4 89 aa5.3□□□□□ -1.56
NEDD1-211ENST00000557454 TCRAP04437 139 aa5.3□□□□□ -1.56
NEDD1-211ENST00000557454 C11orf1Q9H5F2 150 aa5.3□□□□□ -1.56
NEDD1-211ENST00000557454 RAB26Q9ULW5 256 aa5.3□□□□□ -1.56
NEDD1-211ENST00000557454 TMSB15BA0A087X1C1 80 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 FABP5P3A8MUU1 101 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 RGS5O15539 181 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 TMBIM6P55061 237 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 HBG1P69891 147 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 HBG2P69892 147 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 STX12Q86Y82 276 aa5.29□□□□□ -1.56
NEDD1-211ENST00000557454 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
NEDD1-211ENST00000557454 K7EQM0 130 aa5.28□□□□□ -1.56
NEDD1-211ENST00000557454 M0QXV9 152 aa5.28□□□□□ -1.56
NEDD1-211ENST00000557454 FAUP35544 74 aaKnown RBP5.28□□□□□ -1.56
NEDD1-211ENST00000557454 TAS2R45P59539 299 aa5.28□□□□□ -1.56
NEDD1-211ENST00000557454 SS18Q15532 418 aa5.28□□□□□ -1.56
NEDD1-211ENST00000557454 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
NEDD1-211ENST00000557454 TMEM252Q8N6L7 170 aa5.28□□□□□ -1.56
NEDD1-211ENST00000557454 SLC25A21Q9BQT8 299 aaPredicted RBP5.28□□□□□ -1.56
NEDD1-211ENST00000557454 CTDSP2O14595 271 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 CCL25O15444 150 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 ATP6V1FQ16864 119 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 SAPCD1Q5SSQ6 148 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 C5orf17Q8NAS9 161 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 OR5A1Q8NGJ0 315 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 KCNIP2Q9NS61 270 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 FLVCR2Q9UPI3 526 aa5.27□□□□□ -1.57
NEDD1-211ENST00000557454 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
NEDD1-211ENST00000557454 CRIP1P50238 77 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 DEFA3P59666 94 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 Q6ZNX1 250 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 OR10AG1Q8NH19 301 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 FUNDC2Q9BWH2 189 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 MRPS26Q9BYN8 205 aaKnown RBP5.26□□□□□ -1.57
NEDD1-211ENST00000557454 MED28Q9H204 178 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 VCX3BQ9H321 246 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 RSL24D1Q9UHA3 163 aaKnown RBP5.26□□□□□ -1.57
NEDD1-211ENST00000557454 ARL2-SNX15V9GYD0 113 aa5.26□□□□□ -1.57
NEDD1-211ENST00000557454 TRAV34A0A0B4J273 112 aa5.25□□□□□ -1.57
NEDD1-211ENST00000557454 SH2D1AO60880 128 aa5.25□□□□□ -1.57
NEDD1-211ENST00000557454 NKX2-5P52952 324 aaPredicted RBP5.25□□□□□ -1.57
NEDD1-211ENST00000557454 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
NEDD1-211ENST00000557454 ZNF471Q9BX82 626 aaPredicted RBP5.25□□□□□ -1.57
NEDD1-211ENST00000557454 MUC21A0A140T8X8 626 aa5.24□□□□□ -1.57
NEDD1-211ENST00000557454 C19orf71A6NCJ1 209 aa5.24□□□□□ -1.57
NEDD1-211ENST00000557454 BCL2L11O43521 198 aa5.24□□□□□ -1.57
NEDD1-211ENST00000557454 PVALBP20472 110 aaPredicted RBP5.24□□□□□ -1.57
NEDD1-211ENST00000557454 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
NEDD1-211ENST00000557454 RNASEKQ6P5S7 137 aaKnown RBP5.24□□□□□ -1.57
NEDD1-211ENST00000557454 PGLYRP4Q96LB8 373 aa5.24□□□□□ -1.57
NEDD1-211ENST00000557454 WDR61Q9GZS3 305 aaKnown RBP5.24□□□□□ -1.57
NEDD1-211ENST00000557454 C17orf112F2Z3M2 114 aa5.23□□□□□ -1.57
NEDD1-211ENST00000557454 M0QY20 66 aa5.23□□□□□ -1.57
NEDD1-211ENST00000557454 HMGB3O15347 200 aaKnown RBP5.23□□□□□ -1.57
NEDD1-211ENST00000557454 CTAG1AP78358 180 aa5.23□□□□□ -1.57
NEDD1-211ENST00000557454 PQLC2Q6ZP29 291 aa5.23□□□□□ -1.57
NEDD1-211ENST00000557454 WFDC1Q9HC57 220 aa5.23□□□□□ -1.57
NEDD1-211ENST00000557454 LINC00959A0A1B0GUT2 108 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 FAM25EA8MYX2 175 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 H3BMQ9 156 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 SSTP61278 116 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 COTL1Q14019 142 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 Q86TA4 180 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 TOMM5Q8N4H5 51 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 CTDSP1Q9GZU7 261 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 EPDR1Q9UM22 224 aa5.22□□□□□ -1.57
NEDD1-211ENST00000557454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.21□□□□□ -1.58
NEDD1-211ENST00000557454 IGKV2-29A2NJV5 120 aaPredicted RBP5.21□□□□□ -1.58
NEDD1-211ENST00000557454 MGPP08493 103 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 SMIM17P0DL12 118 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 AP3S2P59780 193 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 GAGE2EQ4V326 116 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 SUMO4Q6EEV6 95 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 CD164L2Q6UWJ8 174 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 C2orf48Q96LS8 159 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 GAGE2DQ9UEU5 116 aa5.21□□□□□ -1.58
NEDD1-211ENST00000557454 IGKV2D-26A0A0A0MRZ7 120 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 A0A1B0GVG6 124 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 NUPR1O60356 82 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 ARL14EPLP0DKL9 152 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 ESDP10768 282 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
NEDD1-211ENST00000557454 SPANXN1Q5VSR9 72 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 VCX3AQ9NNX9 186 aa5.2□□□□□ -1.58
NEDD1-211ENST00000557454 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 IGLV8-61A0A075B6I0 122 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 H0YIZ8 118 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 OR2D3Q8NGH3 330 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 AP1S3Q96PC3 154 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 Q9H521 79 aa5.19□□□□□ -1.58
NEDD1-211ENST00000557454 CFC1P0CG37 223 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 SPAG11BQ08648 103 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 LRRC37A5PQ49AS3 106 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms