RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 PRELID3AQ96N28 172 aa14.35□□□□□ -0.11
FOXA1-205ENST00000557418 C16orf90A8MZG2 172 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 PHOX2AO14813 284 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 POLR2KP53803 58 aaKnown RBP14.34□□□□□ -0.11
FOXA1-205ENST00000557418 TIRAPP58753 221 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 FABP9Q0Z7S8 132 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 TMEM70Q9BUB7 260 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 GTSF1LQ9H1H1 148 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 ST20Q9HBF5 79 aa14.34□□□□□ -0.11
FOXA1-205ENST00000557418 IGHV3-38A0A0C4DH36 116 aa14.33□□□□□ -0.12
FOXA1-205ENST00000557418 SDHAF1A6NFY7 115 aa14.33□□□□□ -0.12
FOXA1-205ENST00000557418 RAB5AP20339 215 aa14.33□□□□□ -0.12
FOXA1-205ENST00000557418 DAZ4Q86SG3 579 aaKnown RBP14.33□□□□□ -0.12
FOXA1-205ENST00000557418 DAZ3Q9NR90 486 aaKnown RBP14.33□□□□□ -0.12
FOXA1-205ENST00000557418 SUMO2P61956 95 aaKnown RBP14.32□□□□□ -0.12
FOXA1-205ENST00000557418 C20orf78Q9BR46 151 aa14.32□□□□□ -0.12
FOXA1-205ENST00000557418 LAMTOR2Q9Y2Q5 125 aa14.32□□□□□ -0.12
FOXA1-205ENST00000557418 PRSS47A8MTI9 375 aa14.31□□□□□ -0.12
FOXA1-205ENST00000557418 RPL32P62910 135 aaKnown RBP14.31□□□□□ -0.12
FOXA1-205ENST00000557418 NTM-AS1Q6ZSK4 140 aa14.31□□□□□ -0.12
FOXA1-205ENST00000557418 SPATA12Q7Z6I5 190 aa14.31□□□□□ -0.12
FOXA1-205ENST00000557418 ALKBH7Q9BT30 221 aaPredicted RBP14.31□□□□□ -0.12
FOXA1-205ENST00000557418 TRBV27A0A0K0K1C4 114 aa14.3□□□□□ -0.12
FOXA1-205ENST00000557418 WFDC10BQ8IUB3 73 aa14.29□□□□□ -0.12
FOXA1-205ENST00000557418 K7EP13 123 aa14.28□□□□□ -0.12
FOXA1-205ENST00000557418 LELP1Q5T871 98 aa14.28□□□□□ -0.12
FOXA1-205ENST00000557418 NFE4Q86UQ8 179 aa14.28□□□□□ -0.12
FOXA1-205ENST00000557418 I3L3M4 83 aa14.27□□□□□ -0.13
FOXA1-205ENST00000557418 VCYO14598 125 aa14.27□□□□□ -0.13
FOXA1-205ENST00000557418 TRGC2P03986 189 aa14.27□□□□□ -0.13
FOXA1-205ENST00000557418 Q6ZRN7 208 aaPredicted RBP14.27□□□□□ -0.13
FOXA1-205ENST00000557418 DEFB104AQ8WTQ1 72 aa14.27□□□□□ -0.13
FOXA1-205ENST00000557418 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
FOXA1-205ENST00000557418 TRBV6-8A0A0A6YYG3 113 aa14.26□□□□□ -0.13
FOXA1-205ENST00000557418 TSHBP01222 138 aa14.26□□□□□ -0.13
FOXA1-205ENST00000557418 DNAH10OSP0CZ25 163 aa14.26□□□□□ -0.13
FOXA1-205ENST00000557418 TMEM97Q5BJF2 176 aa14.26□□□□□ -0.13
FOXA1-205ENST00000557418 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.26□□□□□ -0.13
FOXA1-205ENST00000557418 PMCHP20382 165 aa14.25□□□□□ -0.13
FOXA1-205ENST00000557418 MAP1LC3AQ9H492 121 aa14.25□□□□□ -0.13
FOXA1-205ENST00000557418 TRAV8-6A0A0B4J262 113 aa14.24□□□□□ -0.13
FOXA1-205ENST00000557418 EREGO14944 169 aa14.24□□□□□ -0.13
FOXA1-205ENST00000557418 COTL1Q14019 142 aa14.24□□□□□ -0.13
FOXA1-205ENST00000557418 IQCJQ1A5X6 159 aa14.24□□□□□ -0.13
FOXA1-205ENST00000557418 KRTAP17-1Q9BYP8 105 aa14.24□□□□□ -0.13
FOXA1-205ENST00000557418 LOC389332A0A1B0GUA5 103 aa14.23□□□□□ -0.13
FOXA1-205ENST00000557418 KRTAP10-2P60368 255 aa14.23□□□□□ -0.13
FOXA1-205ENST00000557418 C10orf126Q8N4M7 172 aa14.23□□□□□ -0.13
FOXA1-205ENST00000557418 Q8N8P6 123 aa14.22□□□□□ -0.13
FOXA1-205ENST00000557418 LRP1BQ9NZR2 4599 aa14.22□□□□□ -0.13
FOXA1-205ENST00000557418 IGHV1-24A0A0C4DH33 117 aa14.21□□□□□ -0.13
FOXA1-205ENST00000557418 C18orf32Q8TCD1 76 aa14.21□□□□□ -0.13
FOXA1-205ENST00000557418 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.13
FOXA1-205ENST00000557418 TRBV25-1A0A075B6N4 114 aa14.2□□□□□ -0.14
FOXA1-205ENST00000557418 CDK2AP2O75956 126 aa14.2□□□□□ -0.14
FOXA1-205ENST00000557418 ESDP10768 282 aa14.2□□□□□ -0.14
FOXA1-205ENST00000557418 IFI27P40305 119 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-205ENST00000557418 KIR2DL4Q99706 377 aa14.2□□□□□ -0.14
FOXA1-205ENST00000557418 NXT2Q9NPJ8 142 aaKnown RBP14.2□□□□□ -0.14
FOXA1-205ENST00000557418 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
FOXA1-205ENST00000557418 TCAPO15273 167 aa14.19□□□□□ -0.14
FOXA1-205ENST00000557418 AMTP48728 403 aa14.19□□□□□ -0.14
FOXA1-205ENST00000557418 RYR1P21817 5038 aa14.18□□□□□ -0.14
FOXA1-205ENST00000557418 LINC01556Q5JQF7 62 aa14.18□□□□□ -0.14
FOXA1-205ENST00000557418 TMEM243Q9BU79 118 aa14.18□□□□□ -0.14
FOXA1-205ENST00000557418 LINC01546A6NGU7 62 aa14.17□□□□□ -0.14
FOXA1-205ENST00000557418 FCER1GP30273 86 aa14.17□□□□□ -0.14
FOXA1-205ENST00000557418 NIT1Q86X76 327 aa14.17□□□□□ -0.14
FOXA1-205ENST00000557418 URB1-AS1Q96HZ7 61 aa14.17□□□□□ -0.14
FOXA1-205ENST00000557418 Q8N3U1 123 aa14.16□□□□□ -0.14
FOXA1-205ENST00000557418 CHCHD5Q9BSY4 110 aa14.16□□□□□ -0.14
FOXA1-205ENST00000557418 A0A087WTM6 91 aa14.15□□□□□ -0.14
FOXA1-205ENST00000557418 IBA57-AS1B1ANH7 110 aa14.15□□□□□ -0.14
FOXA1-205ENST00000557418 PRSS3P2Q8NHM4 247 aa14.15□□□□□ -0.14
FOXA1-205ENST00000557418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-205ENST00000557418 IGKV2-29A2NJV5 120 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-205ENST00000557418 K7EMI3 77 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 IGHV3-30P01768 117 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 IGHV3-33P01772 117 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 IGHV3-30-3P0DP02 117 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 IGHV3-30-5P0DP03 117 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 GAGE6Q13070 117 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 C20orf203Q8NBC4 194 aa14.14□□□□□ -0.15
FOXA1-205ENST00000557418 HSPG2P98160 4391 aa14.13□□□□□ -0.15
FOXA1-205ENST00000557418 Q0VG73 95 aa14.13□□□□□ -0.15
FOXA1-205ENST00000557418 DNAH5Q8TE73 4624 aa14.13□□□□□ -0.15
FOXA1-205ENST00000557418 H7C423 109 aa14.12□□□□□ -0.15
FOXA1-205ENST00000557418 PSCAO43653 123 aa14.12□□□□□ -0.15
FOXA1-205ENST00000557418 LAGE3Q14657 143 aa14.12□□□□□ -0.15
FOXA1-205ENST00000557418 MPV17L2Q567V2 206 aa14.12□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BKO60814 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BJP06899 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 LINC00614P0C842 121 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BOP23527 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BBP33778 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 FUSP35637 526 aaKnown RBP eCLIP14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BDP58876 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BCP62807 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST2H2BEQ16778 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 ORMDL2Q53FV1 153 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms