RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TDRG1Q3Y452 100 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 SMUG1Q53HV7 270 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 ACTL10Q5JWF8 245 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 TMEM78Q5T7P6 136 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 TEX43Q6ZNM6 134 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 FOXI2Q6ZQN5 318 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 TCF24Q7RTU0 167 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 FAM24BQ8N5W8 94 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 OR8A1Q8NGG7 326 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 OR10J6PQ8NGY7 276 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 RMI2Q96E14 147 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 ZC2HC1AQ96GY0 325 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 SMR3AQ99954 134 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 C20orf144Q9BQM9 153 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 GNB1LQ9BYB4 327 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 MS4A6AQ9H2W1 248 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 RPP21Q9H633 154 aaKnown RBP1.91□□□□□ -2.1
VRK1-207ENST00000557352 NAT8BQ9UHF3 227 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 GOLT1BQ9Y3E0 138 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 TRRAPQ9Y4A5 3859 aa1.91□□□□□ -2.1
VRK1-207ENST00000557352 IGHV3OR16-8A0A075B7F1 116 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 IGKV2-40A0A087WW87 121 aaPredicted RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 TRAV8-1A0A0A6YYK1 113 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 IGHV3-74A0A0B4J1X5 117 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 TRAV21A0A0B4J279 112 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 ZNF705GA8MUZ8 300 aaPredicted RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 HIGD1CA8MV81 97 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 F6UB75 175 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 ZNF207O43670 478 aaKnown RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 GATCO43716 136 aaKnown RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 SH2D1AO60880 128 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 IGKV2D-40P01614 121 aaPredicted RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 IGLC6P0CF74 106 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 MGST1P10620 155 aaKnown RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 ESDP10768 282 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 CRIP1P50238 77 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 RAB5BP61020 215 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 HBBP68871 147 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 RNASEKQ6P5S7 137 aaKnown RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 AMTNQ6UX39 209 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 LINC00322Q6ZN03 302 aaPredicted RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 PRNTQ86SH4 94 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 TMEM256Q8N2U0 113 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 DEFB125Q8N687 156 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 ZNF738Q8NE65 137 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 WFDC9Q8NEX5 89 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 NUP35Q8NFH5 326 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 PTH2Q96A98 100 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 KCNS1Q96KK3 526 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 PACRGQ96M98 296 aaPredicted RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 AGPAT4-IT1Q9H0P7 198 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 RNASE7Q9H1E1 156 aaKnown RBP1.9□□□□□ -2.11
VRK1-207ENST00000557352 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
VRK1-207ENST00000557352 MGAM2Q2M2H8 2515 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 IGHV3-49A0A0A0MS15 119 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 TGIF2-C20orf24A0A0A6YYL0 155 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 A0A1B0GUT8 65 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 TMEM189A5PLL7 270 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
VRK1-207ENST00000557352 H3BMM0 161 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BKO60814 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 PPBPP02775 128 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BJP06899 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 TLX1NBP0CAT3 122 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HLA-DMBP28068 263 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 CACNG7P62955 275 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 Q0VG73 95 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 DEFB136Q30KP8 78 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 MAJINQ3KP22 176 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 OR10J3Q5JRS4 329 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
VRK1-207ENST00000557352 PRR9Q5T870 116 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 EBLN2Q6P2I7 272 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 TMEM136Q6ZRR5 245 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 OR2D3Q8NGH3 330 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 DYNLRB2Q8TF09 96 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 BORCS7Q96B45 105 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 TMEM191AQ9H0A3 160 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 EDA2RQ9HAV5 297 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 ZMAT5Q9UDW3 170 aaKnown RBP1.89□□□□□ -2.11
VRK1-207ENST00000557352 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 URGCP-MRPS24S4R325 110 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 ANK2Q01484 3957 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 CMYA5Q8N3K9 4069 aa1.89□□□□□ -2.11
VRK1-207ENST00000557352 IGLV1-50A0A075B6I6 118 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms