RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
NEDD1-209ENST00000557092 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
NEDD1-209ENST00000557092 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
NEDD1-209ENST00000557092 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
NEDD1-209ENST00000557092 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
NEDD1-209ENST00000557092 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
NEDD1-209ENST00000557092 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
NEDD1-209ENST00000557092 REG3AQ06141 175 aa12.04□□□□□ -0.48
NEDD1-209ENST00000557092 Q6ZSA8 131 aa12.04□□□□□ -0.48
NEDD1-209ENST00000557092 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
NEDD1-209ENST00000557092 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
NEDD1-209ENST00000557092 C20orf203Q8NBC4 194 aa12.03□□□□□ -0.48
NEDD1-209ENST00000557092 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
NEDD1-209ENST00000557092 A0A1B0GUV1 79 aa12.02□□□□□ -0.49
NEDD1-209ENST00000557092 TEX261Q6UWH6 196 aa12.02□□□□□ -0.49
NEDD1-209ENST00000557092 TSKUQ8WUA8 353 aa12.02□□□□□ -0.49
NEDD1-209ENST00000557092 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
NEDD1-209ENST00000557092 HIGD1CA8MV81 97 aa12.01□□□□□ -0.49
NEDD1-209ENST00000557092 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
NEDD1-209ENST00000557092 A0A1B0GUT8 65 aa12□□□□□ -0.49
NEDD1-209ENST00000557092 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
NEDD1-209ENST00000557092 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
NEDD1-209ENST00000557092 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
NEDD1-209ENST00000557092 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
NEDD1-209ENST00000557092 APCSP02743 223 aa11.98□□□□□ -0.49
NEDD1-209ENST00000557092 PRSS1P07477 247 aa11.98□□□□□ -0.49
NEDD1-209ENST00000557092 TMEM241Q24JQ0 296 aa11.98□□□□□ -0.49
NEDD1-209ENST00000557092 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
NEDD1-209ENST00000557092 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 NCR2O95944 276 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 ADIRFQ15847 76 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 FAM74A3Q4VXF1 159 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 ISOC2Q96AB3 205 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 V9GYV3 84 aa11.97□□□□□ -0.49
NEDD1-209ENST00000557092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
NEDD1-209ENST00000557092 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
NEDD1-209ENST00000557092 PMCHP20382 165 aa11.96□□□□□ -0.49
NEDD1-209ENST00000557092 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
NEDD1-209ENST00000557092 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
NEDD1-209ENST00000557092 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.49
NEDD1-209ENST00000557092 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
NEDD1-209ENST00000557092 I3L3M4 83 aa11.95□□□□□ -0.5
NEDD1-209ENST00000557092 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
NEDD1-209ENST00000557092 RIGQ13278 110 aa11.95□□□□□ -0.5
NEDD1-209ENST00000557092 PEA15Q15121 130 aa11.95□□□□□ -0.5
NEDD1-209ENST00000557092 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
NEDD1-209ENST00000557092 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 C9JQL5 133 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
NEDD1-209ENST00000557092 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 AMN1Q8IY45 258 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 ST20Q9HBF5 79 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 NAT8Q9UHE5 227 aa11.94□□□□□ -0.5
NEDD1-209ENST00000557092 hDV102S1A0JD36 115 aa11.93□□□□□ -0.5
NEDD1-209ENST00000557092 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
NEDD1-209ENST00000557092 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
NEDD1-209ENST00000557092 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
NEDD1-209ENST00000557092 SRRM2Q9UQ35 2752 aaKnown RBP11.92□□□□□ -0.5
NEDD1-209ENST00000557092 H7C423 109 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 FGF6P10767 208 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 RAB4AP20338 218 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 MRAP2Q96G30 205 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
NEDD1-209ENST00000557092 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
NEDD1-209ENST00000557092 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
NEDD1-209ENST00000557092 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
NEDD1-209ENST00000557092 RPS10P46783 165 aaKnown RBP11.9□□□□□ -0.5
NEDD1-209ENST00000557092 BTF3L4Q96K17 158 aa11.9□□□□□ -0.5
NEDD1-209ENST00000557092 SMDT1Q9H4I9 107 aa11.9□□□□□ -0.5
NEDD1-209ENST00000557092 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
NEDD1-209ENST00000557092 TSHBP01222 138 aa11.89□□□□□ -0.51
NEDD1-209ENST00000557092 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-209ENST00000557092 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
NEDD1-209ENST00000557092 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
NEDD1-209ENST00000557092 ESDP10768 282 aa11.87□□□□□ -0.51
NEDD1-209ENST00000557092 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
NEDD1-209ENST00000557092 CNBPP62633 177 aaKnown RBP11.87□□□□□ -0.51
NEDD1-209ENST00000557092 OR5A1Q8NGJ0 315 aa11.87□□□□□ -0.51
NEDD1-209ENST00000557092 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
NEDD1-209ENST00000557092 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
NEDD1-209ENST00000557092 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.86□□□□□ -0.51
NEDD1-209ENST00000557092 PPP1R17O96001 155 aa11.86□□□□□ -0.51
NEDD1-209ENST00000557092 CAMPP49913 170 aa11.86□□□□□ -0.51
NEDD1-209ENST00000557092 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
NEDD1-209ENST00000557092 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
NEDD1-209ENST00000557092 C7orf77A4D0Y5 90 aa11.85□□□□□ -0.51
NEDD1-209ENST00000557092 FCER1GP30273 86 aa11.85□□□□□ -0.51
NEDD1-209ENST00000557092 MYCBP2O75592 4640 aa11.84□□□□□ -0.51
NEDD1-209ENST00000557092 VCYO14598 125 aa11.84□□□□□ -0.51
NEDD1-209ENST00000557092 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
NEDD1-209ENST00000557092 MRPL51Q4U2R6 128 aaKnown RBP11.84□□□□□ -0.51
NEDD1-209ENST00000557092 FAM104BQ5XKR9 115 aa11.84□□□□□ -0.51
NEDD1-209ENST00000557092 C15orf56Q8N910 161 aa11.84□□□□□ -0.51
NEDD1-209ENST00000557092 NRACQ8N912 160 aa11.84□□□□□ -0.51
NEDD1-209ENST00000557092 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms