RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MT1HP80294 61 aa7.23□□□□□ -1.25
PSEN1-220ENST00000557037 AMMECR1LQ6DCA0 310 aa7.23□□□□□ -1.25
PSEN1-220ENST00000557037 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
PSEN1-220ENST00000557037 OR5A1Q8NGJ0 315 aa7.23□□□□□ -1.25
PSEN1-220ENST00000557037 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-220ENST00000557037 BTCP35070 178 aa7.22□□□□□ -1.25
PSEN1-220ENST00000557037 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
PSEN1-220ENST00000557037 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
PSEN1-220ENST00000557037 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-220ENST00000557037 TSKUQ8WUA8 353 aa7.22□□□□□ -1.25
PSEN1-220ENST00000557037 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
PSEN1-220ENST00000557037 RBM38Q9H0Z9 239 aaKnown RBP7.22□□□□□ -1.25
PSEN1-220ENST00000557037 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
PSEN1-220ENST00000557037 UBE2BP63146 152 aa7.21□□□□□ -1.26
PSEN1-220ENST00000557037 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.26
PSEN1-220ENST00000557037 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
PSEN1-220ENST00000557037 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
PSEN1-220ENST00000557037 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
PSEN1-220ENST00000557037 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-220ENST00000557037 COTL1Q14019 142 aa7.2□□□□□ -1.26
PSEN1-220ENST00000557037 LRRC37A5PQ49AS3 106 aa7.2□□□□□ -1.26
PSEN1-220ENST00000557037 PEX7O00628 323 aa7.19□□□□□ -1.26
PSEN1-220ENST00000557037 GHRHP01286 108 aa7.19□□□□□ -1.26
PSEN1-220ENST00000557037 CDC34P49427 236 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-220ENST00000557037 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
PSEN1-220ENST00000557037 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
PSEN1-220ENST00000557037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-220ENST00000557037 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 IGKV2-29A2NJV5 120 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-220ENST00000557037 H0YIZ8 118 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 ZNF861PO60384 105 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 TRIQKQ629K1 86 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 AP1S3Q96PC3 154 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
PSEN1-220ENST00000557037 BCL2L11O43521 198 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 TSHBP01222 138 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 COX8CQ7Z4L0 72 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 MED28Q9H204 178 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 ZFP30Q9Y2G7 519 aa7.17□□□□□ -1.26
PSEN1-220ENST00000557037 USH2AO75445 5202 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 SNAI2O43623 268 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 SIX6O95475 246 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 UBE2G2P60604 165 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 HSPB11Q9Y547 144 aa7.16□□□□□ -1.26
PSEN1-220ENST00000557037 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-220ENST00000557037 CENPXA8MT69 81 aa7.15□□□□□ -1.26
PSEN1-220ENST00000557037 M0QXV9 152 aa7.15□□□□□ -1.26
PSEN1-220ENST00000557037 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.26
PSEN1-220ENST00000557037 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
PSEN1-220ENST00000557037 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
PSEN1-220ENST00000557037 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
PSEN1-220ENST00000557037 A0A1W2PRE2 83 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 OR5AL1P0C617 328 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 MALP21145 153 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 SS18Q15532 418 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 NIT2Q9NQR4 276 aa7.14□□□□□ -1.27
PSEN1-220ENST00000557037 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 CXorf1O96002 111 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 UBE2G1P62253 170 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 CNPY1Q3B7I2 92 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 Q6ZNX1 250 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 C2orf48Q96LS8 159 aa7.13□□□□□ -1.27
PSEN1-220ENST00000557037 CXCL1P09341 107 aa7.12□□□□□ -1.27
PSEN1-220ENST00000557037 NTF3P20783 257 aa7.12□□□□□ -1.27
PSEN1-220ENST00000557037 S100A5P33763 92 aa7.12□□□□□ -1.27
PSEN1-220ENST00000557037 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
PSEN1-220ENST00000557037 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
PSEN1-220ENST00000557037 LTAP01374 205 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 KRTAP13-3Q3SY46 172 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 NUDT15Q9NV35 164 aa7.11□□□□□ -1.27
PSEN1-220ENST00000557037 COX7A2LO14548 114 aa7.1□□□□□ -1.27
PSEN1-220ENST00000557037 ESDP10768 282 aa7.1□□□□□ -1.27
PSEN1-220ENST00000557037 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
PSEN1-220ENST00000557037 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
PSEN1-220ENST00000557037 H7C423 109 aa7.09□□□□□ -1.27
PSEN1-220ENST00000557037 APCSP02743 223 aa7.09□□□□□ -1.27
PSEN1-220ENST00000557037 DEFA1P59665 94 aa7.09□□□□□ -1.27
PSEN1-220ENST00000557037 SPAG11BQ08648 103 aa7.09□□□□□ -1.27
PSEN1-220ENST00000557037 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
PSEN1-220ENST00000557037 FAM74A7A6NL05 159 aa7.08□□□□□ -1.28
PSEN1-220ENST00000557037 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
PSEN1-220ENST00000557037 IMMP2LQ96T52 175 aa7.08□□□□□ -1.28
PSEN1-220ENST00000557037 ACTR3CQ9C0K3 210 aaPredicted RBP7.08□□□□□ -1.28
PSEN1-220ENST00000557037 M0R2T5 61 aa7.07□□□□□ -1.28
PSEN1-220ENST00000557037 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
PSEN1-220ENST00000557037 C10orf25Q5T742 122 aa7.07□□□□□ -1.28
PSEN1-220ENST00000557037 C5orf38Q86SI9 138 aa7.07□□□□□ -1.28
PSEN1-220ENST00000557037 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
PSEN1-220ENST00000557037 PLA2G10O15496 165 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms