RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 F5H697 171 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 SCO1O75880 301 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 OXTP01178 125 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 COX19Q49B96 90 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 WFDC10BQ8IUB3 73 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 CBLN2Q8IUK8 224 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 C14orf178Q8N769 122 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-224ENST00000557024 DPH3P1Q9H4G8 78 aa6.24□□□□□ -1.41
SYNE2-224ENST00000557024 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
SYNE2-224ENST00000557024 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 RHODO00212 210 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 RS1O15537 224 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 PSCAO43653 123 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 CIDEAO60543 219 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 ELOBQ15370 118 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 ZNF56Q15929 161 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 RASL11AQ6T310 242 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 JPT2Q9H910 190 aa6.23□□□□□ -1.41
SYNE2-224ENST00000557024 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
SYNE2-224ENST00000557024 IGHV3-73A0A0B4J1V6 119 aa6.22□□□□□ -1.41
SYNE2-224ENST00000557024 EVI2AP22794 236 aa6.22□□□□□ -1.41
SYNE2-224ENST00000557024 Q8N814 137 aa6.22□□□□□ -1.41
SYNE2-224ENST00000557024 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
SYNE2-224ENST00000557024 TRBV24-1A0A075B6N3 115 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 HLA-DQA1P01909 254 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 CRYGDP07320 174 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 SLAQ13239 276 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 CFAP126Q5VTH2 177 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 Q6ZSA8 131 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 ZNF479Q96JC4 524 aa6.21□□□□□ -1.42
SYNE2-224ENST00000557024 A0A1B0GXF2 115 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 K7EP13 123 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 MT-ND6P03923 174 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 RPS10P46783 165 aaKnown RBP6.2□□□□□ -1.42
SYNE2-224ENST00000557024 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-224ENST00000557024 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
SYNE2-224ENST00000557024 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 ZFP2Q6ZN57 461 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 NEGR1Q7Z3B1 354 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 TRAPPC1Q9Y5R8 145 aa6.2□□□□□ -1.42
SYNE2-224ENST00000557024 H7C1H1 209 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 APCSP02743 223 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 CRYBA4P53673 196 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 FABP9Q0Z7S8 132 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-224ENST00000557024 PRADC1Q9BSG0 188 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 PRO0255Q9UI72 69 aa6.19□□□□□ -1.42
SYNE2-224ENST00000557024 K7EQD1 137 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 RAB4AP20338 218 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 CKS2P33552 79 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 RHOHQ15669 191 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 TMEM136Q6ZRR5 245 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 SCXQ7RTU7 201 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 C10orf126Q8N4M7 172 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 GATD1Q8NB37 220 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 Q9HAA7 133 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 HHLA3Q9XRX5 114 aa6.18□□□□□ -1.42
SYNE2-224ENST00000557024 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 PPP1R17O96001 155 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 PPBPP02775 128 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-224ENST00000557024 RAB5AP20339 215 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 SRIP30626 198 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 FHL2Q14192 279 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 KIAA1644Q3SXP7 199 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
SYNE2-224ENST00000557024 OR10J3Q5JRS4 329 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 YPEL4Q96NS1 127 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
SYNE2-224ENST00000557024 TRAV26-2A0A0B4J265 109 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 TRBV6-4A0A1B0GX49 114 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 COLCA2A8K830 154 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 D6R8Y8 96 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 RPL36AP83881 106 aaKnown RBP6.16□□□□□ -1.42
SYNE2-224ENST00000557024 WFDC2Q14508 124 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 ORMDL3Q8N138 153 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 RPL36ALQ969Q0 106 aaKnown RBP6.16□□□□□ -1.42
SYNE2-224ENST00000557024 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
SYNE2-224ENST00000557024 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 GAGE12JA6NER3 117 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 NCR2O95944 276 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 GAGE1Q13065 139 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 GAGE4Q13068 117 aa6.15□□□□□ -1.42
SYNE2-224ENST00000557024 GAGE5Q13069 117 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms