RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 LOC107984640A0A0U1RRK4 108 aa3.67□□□□□ -1.82
SYNE2-223ENST00000557005 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-223ENST00000557005 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
SYNE2-223ENST00000557005 NKAPP1Q8N9T2 125 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 FAM110AQ9BQ89 295 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 CHCHD7Q9BUK0 85 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 POLR2KP53803 58 aaKnown RBP3.66□□□□□ -1.82
SYNE2-223ENST00000557005 CENPFP49454 3210 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 HCFC1P51610 2035 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 Q6ZSN1 163 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 SMIM11BQ8TCY0 68 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 SNURFQ9Y675 71 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 Q6Q795 121 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 SVIPQ8NHG7 77 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 DNAH12Q6ZR08 3092 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 KLLNB2CW77 178 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 LMO4P61968 165 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 DCANP1Q8TF63 244 aa3.66□□□□□ -1.82
SYNE2-223ENST00000557005 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.82
SYNE2-223ENST00000557005 F8WEM9 126 aa3.65□□□□□ -1.82
SYNE2-223ENST00000557005 FHL3Q13643 280 aa3.65□□□□□ -1.82
SYNE2-223ENST00000557005 K7EQG2 157 aa3.65□□□□□ -1.83
SYNE2-223ENST00000557005 TMEM256-PLSCR3K7ERE1 68 aa3.65□□□□□ -1.83
SYNE2-223ENST00000557005 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
SYNE2-223ENST00000557005 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
SYNE2-223ENST00000557005 CSDC2Q9Y534 153 aaKnown RBP3.65□□□□□ -1.83
SYNE2-223ENST00000557005 TIMM17BO60830 172 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 COX7CP15954 63 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 A0A087WVE0 104 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 TMEM258P61165 79 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 LRRC75A-AS1Q8N1F1 130 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 GON4LQ3T8J9 2241 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 ASXL3Q9C0F0 2248 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 PPDPFQ9H3Y8 114 aa3.64□□□□□ -1.83
SYNE2-223ENST00000557005 A0A0U1RQV1 116 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 LINC00269Q8N2A0 174 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 COL27A1Q8IZC6 1860 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-223ENST00000557005 NCOA6Q14686 2063 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-223ENST00000557005 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 MYO9BQ13459 2157 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 PRR14LQ5THK1 2151 aa3.63□□□□□ -1.83
SYNE2-223ENST00000557005 IGLV1-40P01703 118 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 ZNF702PQ9H963 129 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 APOC4P55056 127 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 F5P12259 2224 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 IGKV2D-24A0A075B6R9 120 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 HIGD2BQ4VC39 106 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-223ENST00000557005 Q6JHZ5 121 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 DIDO1Q9BTC0 2240 aaKnown RBP3.62□□□□□ -1.83
SYNE2-223ENST00000557005 NDUFC2O95298 119 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 Q6YL49 198 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 CCKP06307 115 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 WFDC10AQ9H1F0 79 aa3.62□□□□□ -1.83
SYNE2-223ENST00000557005 SMIM9A6NGZ8 99 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 SHISA2Q6UWI4 295 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 FAM19A5Q7Z5A7 132 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-223ENST00000557005 LINC00526Q96FQ7 95 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 AMELXQ99217 191 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 USP17L23D6RBM5 183 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 COX7BP24311 80 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 CHCHD10Q8WYQ3 142 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-223ENST00000557005 KIAA0100Q14667 2235 aaKnown RBP3.61□□□□□ -1.83
SYNE2-223ENST00000557005 DSCAMO60469 2012 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 HILS1P60008 231 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 PRR3P79522 188 aaKnown RBP3.61□□□□□ -1.83
SYNE2-223ENST00000557005 DEFB114Q30KQ6 69 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 PKIGQ9Y2B9 76 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 NREPQ16612 68 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 GTF3C1Q12789 2109 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 UBE2DNLQ8IWF7 75 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 FAM19A4Q96LR4 140 aa3.61□□□□□ -1.83
SYNE2-223ENST00000557005 PTPRBP23467 1997 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 IGHV4-31P0DP07 118 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 REG3AQ06141 175 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 DEFB113Q30KQ7 82 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 FAM30AQ9NZY2 134 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 FAM240AA0A1B0GVK7 77 aa3.6□□□□□ -1.83
SYNE2-223ENST00000557005 CDK2AP2O75956 126 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms