RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1.01
PSEN1-219ENST00000556951 C20orf78Q9BR46 151 aa8.77□□□□□ -1.01
PSEN1-219ENST00000556951 MAP1LC3AQ9H492 121 aa8.77□□□□□ -1.01
PSEN1-219ENST00000556951 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
PSEN1-219ENST00000556951 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 LOC389332A0A1B0GUA5 103 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 CIDEAO60543 219 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 LINC00310P59036 64 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 DAD1P61803 113 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 ZNF56Q15929 161 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 FA2HQ7L5A8 372 aa8.76□□□□□ -1.01
PSEN1-219ENST00000556951 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 H7C1H1 209 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 M0QY20 66 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
PSEN1-219ENST00000556951 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
PSEN1-219ENST00000556951 URB1-AS1Q96HZ7 61 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 NXT2Q9NPJ8 142 aaKnown RBP8.75□□□□□ -1.01
PSEN1-219ENST00000556951 LRP2P98164 4655 aa8.75□□□□□ -1.01
PSEN1-219ENST00000556951 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 GAGE12BA1L429 117 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 IFITM10A6NMD0 228 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 GAGE7O76087 117 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 GAGE12FP0CL80 117 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 GAGE12GP0CL81 117 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 GAGE12IP0CL82 117 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 PMCHP20382 165 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 IFI27P40305 119 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-219ENST00000556951 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
PSEN1-219ENST00000556951 LINC00612Q8N6U2 182 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 Q8N8P6 123 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 TMEM18Q96B42 140 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-219ENST00000556951 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
PSEN1-219ENST00000556951 LINC01546A6NGU7 62 aa8.73□□□□□ -1.01
PSEN1-219ENST00000556951 HSBP1O75506 76 aa8.73□□□□□ -1.01
PSEN1-219ENST00000556951 IGHV3-53P01767 116 aa8.73□□□□□ -1.01
PSEN1-219ENST00000556951 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
PSEN1-219ENST00000556951 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
PSEN1-219ENST00000556951 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
PSEN1-219ENST00000556951 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
PSEN1-219ENST00000556951 NUDT3O95989 172 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 Q6ZSN1 163 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 ZNF479Q96JC4 524 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 Q9H8V8 135 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 AP5S1Q9NUS5 200 aa8.72□□□□□ -1.01
PSEN1-219ENST00000556951 VCYO14598 125 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 FABP4P15090 132 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 FUSP35637 526 aaKnown RBP eCLIP8.71□□□□□ -1.02
PSEN1-219ENST00000556951 CCL18P55774 89 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
PSEN1-219ENST00000556951 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
PSEN1-219ENST00000556951 K7EMI3 77 aa8.7□□□□□ -1.02
PSEN1-219ENST00000556951 AMTP48728 403 aa8.7□□□□□ -1.02
PSEN1-219ENST00000556951 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
PSEN1-219ENST00000556951 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
PSEN1-219ENST00000556951 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
PSEN1-219ENST00000556951 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
PSEN1-219ENST00000556951 IGHV1-24A0A0C4DH33 117 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 F5H768 121 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 AKR1D1P51857 326 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 LAGE3Q14657 143 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-219ENST00000556951 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
PSEN1-219ENST00000556951 TRGV4A0A0C4DH28 118 aa8.68□□□□□ -1.02
PSEN1-219ENST00000556951 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
PSEN1-219ENST00000556951 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
PSEN1-219ENST00000556951 TCAPO15273 167 aa8.68□□□□□ -1.02
PSEN1-219ENST00000556951 FHL2Q14192 279 aa8.68□□□□□ -1.02
PSEN1-219ENST00000556951 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 I3L3M4 83 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 K7EQD1 137 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 FCER1GP30273 86 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 PMCHL1Q16048 86 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 NEXN-AS1Q8NBZ9 246 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 KIR2DL4Q99706 377 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
PSEN1-219ENST00000556951 HBDP02042 147 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-219ENST00000556951 ATP5G1P05496 136 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 G0S2P27469 103 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 ESRGQ1W209 222 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
PSEN1-219ENST00000556951 PKHD1L1Q86WI1 4243 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 LEPROTL1O95214 131 aa8.65□□□□□ -1.02
PSEN1-219ENST00000556951 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms