RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CTRLP40313 264 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 AKAP14Q86UN6 197 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 PGLYRP4Q96LB8 373 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
SPTLC2-205ENST00000556607 A0A1B0GUV1 79 aa6.84□□□□□ -1.31
SPTLC2-205ENST00000556607 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
SPTLC2-205ENST00000556607 C9orf163Q8N9P6 203 aa6.84□□□□□ -1.31
SPTLC2-205ENST00000556607 GATD1Q8NB37 220 aa6.84□□□□□ -1.31
SPTLC2-205ENST00000556607 BORCS7Q96B45 105 aa6.84□□□□□ -1.31
SPTLC2-205ENST00000556607 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.32
SPTLC2-205ENST00000556607 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.32
SPTLC2-205ENST00000556607 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 RPL37AP61513 92 aaKnown RBP6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 EIF5A2Q9GZV4 153 aaKnown RBP6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 GFRA4Q9GZZ7 299 aa6.83□□□□□ -1.32
SPTLC2-205ENST00000556607 A8MWL6 223 aa6.82□□□□□ -1.32
SPTLC2-205ENST00000556607 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
SPTLC2-205ENST00000556607 TMEM250H0YL14 139 aa6.82□□□□□ -1.32
SPTLC2-205ENST00000556607 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
SPTLC2-205ENST00000556607 Q6ZNX1 250 aa6.82□□□□□ -1.32
SPTLC2-205ENST00000556607 HERC1Q15751 4861 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 APCSP02743 223 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 PMCHP20382 165 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 TEX261Q6UWH6 196 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 CNFNQ9BYD5 112 aa6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-205ENST00000556607 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 NCR2O95944 276 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 BTF3L4Q96K17 158 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 SMIM7Q9BQ49 75 aa6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-205ENST00000556607 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
SPTLC2-205ENST00000556607 ZNF727A8MUV8 499 aa6.79□□□□□ -1.32
SPTLC2-205ENST00000556607 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
SPTLC2-205ENST00000556607 HIGD2BQ4VC39 106 aa6.79□□□□□ -1.32
SPTLC2-205ENST00000556607 TMEM101Q96IK0 257 aa6.79□□□□□ -1.32
SPTLC2-205ENST00000556607 PANO1I0J062 215 aa6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 I3L3M4 83 aa6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 FGF6P10767 208 aa6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 CHCHD10Q8WYQ3 142 aaPredicted RBP6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
SPTLC2-205ENST00000556607 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 H7C423 109 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 OXTP01178 125 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 LYPD6BQ8NI32 183 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 TSKUQ8WUA8 353 aa6.77□□□□□ -1.33
SPTLC2-205ENST00000556607 SLPIP03973 132 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 RPS10P46783 165 aaKnown RBP6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 XCL1P47992 114 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 CT83Q5H943 113 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 LINC01551Q86U37 167 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 FAM210AQ96ND0 272 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
SPTLC2-205ENST00000556607 A0A087WYN8 130 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 SRP19P09132 144 aaKnown RBP6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 ZNF25P17030 456 aaPredicted RBP6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 COX6A2Q02221 97 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 MAJINQ3KP22 176 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 OR5A1Q8NGJ0 315 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 MRAP2Q96G30 205 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 TMEM191AQ9H0A3 160 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 OSTCQ9NRP0 149 aa6.75□□□□□ -1.33
SPTLC2-205ENST00000556607 TRBV6-5A0A0K0K1A5 114 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 CCL25O15444 150 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 RAB4AP20338 218 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 FCER1GP30273 86 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 RIGQ13278 110 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 SS18Q15532 418 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 SERTAD4-AS1Q5TG53 156 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
SPTLC2-205ENST00000556607 LINC00959A0A1B0GUT2 108 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 TSHBP01222 138 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 CIRBPQ14011 172 aaKnown RBP6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms