RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-238ENST00000556288 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-238ENST00000556288 RHOHQ15669 191 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 FER1L6-AS1Q8NA97 138 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-238ENST00000556288 IGHV3-38A0A0C4DH36 116 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 PRSS47A8MTI9 375 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 A8MWL6 223 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 F2Z2F3 143 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 K7EN84 100 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 NTF3P20783 257 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 EVI2AP22794 236 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 CACNG7P62955 275 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 ADIRFQ15847 76 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 KCNIP4Q6PIL6 250 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 COX8CQ7Z4L0 72 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 PTH2Q96A98 100 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
ATXN3-238ENST00000556288 Q9UF83 564 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 MRPS16Q9Y3D3 137 aaKnown RBP3.18□□□□□ -1.9
ATXN3-238ENST00000556288 LY96Q9Y6Y9 160 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
ATXN3-238ENST00000556288 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 PSCAO43653 123 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 GAS8-AS1O95177 125 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 CRYGDP07320 174 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 RAB4BP61018 213 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 OR10G8Q8NGN5 311 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 SMIM12Q96EX1 92 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 GTSF1LQ9H1H1 148 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 Q9HAA7 133 aa3.17□□□□□ -1.9
ATXN3-238ENST00000556288 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 SNAI2O43623 268 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 KIAA1644Q3SXP7 199 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-238ENST00000556288 TTC32Q5I0X7 151 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
ATXN3-238ENST00000556288 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 A0A087WX48 190 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 H7C1H1 209 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 RTL8CO15255 209 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 CXCL1P09341 107 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 FOXA3P55318 350 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-238ENST00000556288 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
ATXN3-238ENST00000556288 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 RIGQ13278 110 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 LELP1Q5T871 98 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 Q6ZR54 194 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00336Q6ZUF6 198 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 LINC01551Q86U37 167 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 LITAFQ99732 161 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
ATXN3-238ENST00000556288 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 IGLV9-49A0A0B4J1Y8 123 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 UBE2L6O14933 153 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 PMCHP20382 165 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00315P59091 139 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-238ENST00000556288 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms