RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MED9Q9NWA0 146 aa5.01□□□□□ -1.61
PTCSC3-201ENST00000556013 RAB19A4D1S5 217 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 NCR2O95944 276 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 MGPP08493 103 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 SSTP61278 116 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
PTCSC3-201ENST00000556013 COTL1Q14019 142 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 LYZL1Q6UWQ5 148 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 Q6ZNX1 250 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 SLC51BQ86UW2 128 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 TCTE3Q8IZS6 198 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 NUDT10Q8NFP7 164 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 NUDT11Q96G61 164 aa5□□□□□ -1.61
PTCSC3-201ENST00000556013 UBE2L6O14933 153 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 NDUFS6O75380 124 aaKnown RBP4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 BCL2P10415 239 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 CTRLP40313 264 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 NKX2-5P52952 324 aaPredicted RBP4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 FOXA3P55318 350 aaPredicted RBP4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 Q6ZRU5 148 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 SMIM15Q7Z3B0 74 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 TPPP3Q9BW30 176 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 PKHD1L1Q86WI1 4243 aa4.99□□□□□ -1.61
PTCSC3-201ENST00000556013 TRBV20OR9-2A0A075B6H5 130 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 IGLV4-60A0A075B6I1 120 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 IGHV3-64A0A075B6Q5 118 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 A6NJY4 79 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 TMEM250H0YL14 139 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 TWIST1Q15672 202 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 OCC1Q8TAD7 63 aa4.98□□□□□ -1.61
PTCSC3-201ENST00000556013 IGLV10-54A0A075B6I4 117 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 hDV102S1A0JD36 115 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 SLPIP03973 132 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 AMTP48728 403 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 CLPSL2Q6UWE3 100 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 FAM231DQ6ZW35 169 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 GATD1Q8NB37 220 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 RPP21Q9H633 154 aaKnown RBP4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
PTCSC3-201ENST00000556013 TRBV6-5A0A0K0K1A5 114 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 FAM231BA6NCW3 169 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 A8MWL6 223 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 ATP6V1G1O75348 118 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 RPS10P46783 165 aaKnown RBP4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 BLOC1S1P78537 153 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 CT83Q5H943 113 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 LYPD6BQ8NI32 183 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 DPH3Q96FX2 82 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 PKIGQ9Y2B9 76 aa4.96□□□□□ -1.62
PTCSC3-201ENST00000556013 A0A087WYN8 130 aa4.95□□□□□ -1.62
PTCSC3-201ENST00000556013 I3L3M4 83 aa4.95□□□□□ -1.62
PTCSC3-201ENST00000556013 GTSF1Q8WW33 167 aa4.95□□□□□ -1.62
PTCSC3-201ENST00000556013 hCG_2014768A0A024R1R8 64 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 SDHAF1A6NFY7 115 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 PANO1I0J062 215 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 K7EN84 100 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 CCL25O15444 150 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 GATCO43716 136 aaKnown RBP4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 APCSP02743 223 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 ESDP10768 282 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 NDUFA5Q16718 116 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 AMMECR1LQ6DCA0 310 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 C15orf56Q8N910 161 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 OR5A1Q8NGJ0 315 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 SPACA4Q8TDM5 124 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 CHCHD10Q8WYQ3 142 aaPredicted RBP4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 BTF3L4Q96K17 158 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 RNASE7Q9H1E1 156 aaKnown RBP4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
PTCSC3-201ENST00000556013 GVQW2A0A096LPI5 108 aaPredicted RBP4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 PPP1R17O96001 155 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 FGF6P10767 208 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 PMCHP20382 165 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 S100A1P23297 94 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 HNRNPA3P51991 378 aaKnown RBP4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 RNASEKQ6P5S7 137 aaKnown RBP4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 C7orf33Q8WU49 177 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 BORCS7Q96B45 105 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 TMEM101Q96IK0 257 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 TMEM191AQ9H0A3 160 aa4.93□□□□□ -1.62
PTCSC3-201ENST00000556013 TRAV26-2A0A0B4J265 109 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 IGHV1-58A0A0C4DH39 117 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 TRBV27A0A0K0K1C4 114 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 A0A1B0GUT8 65 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 COX6A2Q02221 97 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 SMAGPQ0VAQ4 97 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 MRPL52Q86TS9 123 aaKnown RBP4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 TSKUQ8WUA8 353 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 RPL39LQ96EH5 51 aaKnown RBP4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 ST20Q9HBF5 79 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 OSTCQ9NRP0 149 aa4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 CSDC2Q9Y534 153 aaKnown RBP4.92□□□□□ -1.62
PTCSC3-201ENST00000556013 TNXBP22105 4242 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms