RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 AP5S1Q9NUS5 200 aa10.02□□□□□ -0.81
SNX6-205ENST00000555648 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
SNX6-205ENST00000555648 hDV102S1A0JD36 115 aa10.01□□□□□ -0.81
SNX6-205ENST00000555648 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
SNX6-205ENST00000555648 ALKAL2Q6UX46 152 aa10.01□□□□□ -0.81
SNX6-205ENST00000555648 BORCS7Q96B45 105 aa10.01□□□□□ -0.81
SNX6-205ENST00000555648 FAT1Q14517 4588 aa10□□□□□ -0.81
SNX6-205ENST00000555648 hCG_2014768A0A024R1R8 64 aa10□□□□□ -0.81
SNX6-205ENST00000555648 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
SNX6-205ENST00000555648 TMEM250H0YL14 139 aa10□□□□□ -0.81
SNX6-205ENST00000555648 K7EN84 100 aa10□□□□□ -0.81
SNX6-205ENST00000555648 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
SNX6-205ENST00000555648 TEX261Q6UWH6 196 aa10□□□□□ -0.81
SNX6-205ENST00000555648 Q6ZNX1 250 aa10□□□□□ -0.81
SNX6-205ENST00000555648 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SNX6-205ENST00000555648 CNFNQ9BYD5 112 aa10□□□□□ -0.81
SNX6-205ENST00000555648 TRAV26-2A0A0B4J265 109 aa9.99□□□□□ -0.81
SNX6-205ENST00000555648 A8MWL6 223 aa9.99□□□□□ -0.81
SNX6-205ENST00000555648 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
SNX6-205ENST00000555648 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
SNX6-205ENST00000555648 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
SNX6-205ENST00000555648 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
SNX6-205ENST00000555648 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
SNX6-205ENST00000555648 NCR2O95944 276 aa9.97□□□□□ -0.81
SNX6-205ENST00000555648 APCSP02743 223 aa9.97□□□□□ -0.81
SNX6-205ENST00000555648 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
SNX6-205ENST00000555648 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
SNX6-205ENST00000555648 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
SNX6-205ENST00000555648 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
SNX6-205ENST00000555648 EIF5A2Q9GZV4 153 aaKnown RBP9.97□□□□□ -0.81
SNX6-205ENST00000555648 KRTAP29-1A8MX34 341 aaPredicted RBP9.96□□□□□ -0.82
SNX6-205ENST00000555648 FAM231DQ6ZW35 169 aa9.96□□□□□ -0.82
SNX6-205ENST00000555648 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
SNX6-205ENST00000555648 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
SNX6-205ENST00000555648 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
SNX6-205ENST00000555648 PMCHP20382 165 aa9.95□□□□□ -0.82
SNX6-205ENST00000555648 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
SNX6-205ENST00000555648 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
SNX6-205ENST00000555648 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
SNX6-205ENST00000555648 SDHAF1A6NFY7 115 aa9.94□□□□□ -0.82
SNX6-205ENST00000555648 H7C423 109 aa9.94□□□□□ -0.82
SNX6-205ENST00000555648 FOXA3P55318 350 aaPredicted RBP9.94□□□□□ -0.82
SNX6-205ENST00000555648 CT83Q5H943 113 aa9.94□□□□□ -0.82
SNX6-205ENST00000555648 BTF3L4Q96K17 158 aa9.94□□□□□ -0.82
SNX6-205ENST00000555648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
SNX6-205ENST00000555648 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
SNX6-205ENST00000555648 I3L3M4 83 aa9.93□□□□□ -0.82
SNX6-205ENST00000555648 SDIM1Q6ZPB5 146 aa9.93□□□□□ -0.82
SNX6-205ENST00000555648 TMEM101Q96IK0 257 aa9.93□□□□□ -0.82
SNX6-205ENST00000555648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
SNX6-205ENST00000555648 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
SNX6-205ENST00000555648 A0A1B0GUT8 65 aa9.92□□□□□ -0.82
SNX6-205ENST00000555648 ZNF727A8MUV8 499 aa9.92□□□□□ -0.82
SNX6-205ENST00000555648 FGF6P10767 208 aa9.92□□□□□ -0.82
SNX6-205ENST00000555648 LYPD6BQ8NI32 183 aa9.92□□□□□ -0.82
SNX6-205ENST00000555648 ST20Q9HBF5 79 aa9.92□□□□□ -0.82
SNX6-205ENST00000555648 TSKUQ8WUA8 353 aa9.91□□□□□ -0.82
SNX6-205ENST00000555648 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
SNX6-205ENST00000555648 HIGD1CA8MV81 97 aa9.9□□□□□ -0.82
SNX6-205ENST00000555648 OXTP01178 125 aa9.9□□□□□ -0.82
SNX6-205ENST00000555648 ZNF25P17030 456 aaPredicted RBP9.9□□□□□ -0.82
SNX6-205ENST00000555648 LINC01551Q86U37 167 aa9.9□□□□□ -0.82
SNX6-205ENST00000555648 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 NDUFS6O75380 124 aaKnown RBP9.89□□□□□ -0.83
SNX6-205ENST00000555648 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 OR5A1Q8NGJ0 315 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 MRAP2Q96G30 205 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 FAM210AQ96ND0 272 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 TMEM191AQ9H0A3 160 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 OSTCQ9NRP0 149 aa9.89□□□□□ -0.83
SNX6-205ENST00000555648 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
SNX6-205ENST00000555648 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
SNX6-205ENST00000555648 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
SNX6-205ENST00000555648 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
SNX6-205ENST00000555648 RIGQ13278 110 aa9.88□□□□□ -0.83
SNX6-205ENST00000555648 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
SNX6-205ENST00000555648 PANO1I0J062 215 aa9.87□□□□□ -0.83
SNX6-205ENST00000555648 C15orf56Q8N910 161 aa9.87□□□□□ -0.83
SNX6-205ENST00000555648 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
SNX6-205ENST00000555648 PPP1R17O96001 155 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 SLPIP03973 132 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 SRP19P09132 144 aaKnown RBP9.86□□□□□ -0.83
SNX6-205ENST00000555648 FCER1GP30273 86 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 XCL1P47992 114 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 SS18Q15532 418 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
SNX6-205ENST00000555648 A0A087WYN8 130 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
SNX6-205ENST00000555648 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 SERTAD4-AS1Q5TG53 156 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 AMN1Q8IY45 258 aa9.85□□□□□ -0.83
SNX6-205ENST00000555648 C7orf77A4D0Y5 90 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 VCYO14598 125 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 TSHBP01222 138 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 RAB4AP20338 218 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 COX6A2Q02221 97 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 FAM74A3Q4VXF1 159 aa9.84□□□□□ -0.83
SNX6-205ENST00000555648 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms