RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 AFDNP55196 1824 aaKnown RBP1.75□□□□□ -2.13
VRK1-205ENST00000555402 RGPD4Q7Z3J3 1758 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 NBDYA0A0U1RRE5 68 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 ATOX1O00244 68 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 SEC11AP67812 179 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 SSBP1Q04837 148 aaKnown RBP1.75□□□□□ -2.13
VRK1-205ENST00000555402 PYY3Q5JQD4 70 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 EXPH5Q8NEV8 1989 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 PSME4Q14997 1843 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 LOC285556D6RIA3 1793 aa1.75□□□□□ -2.13
VRK1-205ENST00000555402 PEAK1Q9H792 1746 aa1.74□□□□□ -2.13
VRK1-205ENST00000555402 CLPSL1A2RUU4 121 aa1.74□□□□□ -2.13
VRK1-205ENST00000555402 CCL3L1P16619 93 aa1.74□□□□□ -2.13
VRK1-205ENST00000555402 DEFB132Q7Z7B7 95 aa1.74□□□□□ -2.13
VRK1-205ENST00000555402 WNK3Q9BYP7 1800 aa1.74□□□□□ -2.13
VRK1-205ENST00000555402 MYO18AQ92614 2054 aaKnown RBP1.74□□□□□ -2.13
VRK1-205ENST00000555402 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 SIPA1L3O60292 1781 aaPredicted RBP1.73□□□□□ -2.13
VRK1-205ENST00000555402 TRBV7-3A0A075B6L6 115 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 FXYD1O00168 92 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 ASIPP42127 132 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 FXYD4P59646 89 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 ZNF56Q15929 161 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 XAF1Q6GPH4 301 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 COX7B2Q8TF08 81 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 NPVFQ9HCQ7 196 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
VRK1-205ENST00000555402 CLTCQ00610 1675 aaKnown RBP1.73□□□□□ -2.13
VRK1-205ENST00000555402 RGPD3A6NKT7 1758 aaPredicted RBP1.72□□□□□ -2.13
VRK1-205ENST00000555402 SFT2D2O95562 160 aa1.72□□□□□ -2.13
VRK1-205ENST00000555402 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
VRK1-205ENST00000555402 MGST2Q99735 147 aa1.72□□□□□ -2.13
VRK1-205ENST00000555402 PPLO60437 1756 aa1.72□□□□□ -2.13
VRK1-205ENST00000555402 OTOGLQ3ZCN5 2332 aa1.72□□□□□ -2.13
VRK1-205ENST00000555402 MYOM1P52179 1685 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 TRBV7-7A0A0K0K1E9 115 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 GYPAP02724 150 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 FAUP35544 74 aaKnown RBP1.71□□□□□ -2.14
VRK1-205ENST00000555402 PPP1R1CQ8WVI7 109 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 LCN9Q8WX39 176 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 FAM167A-AS1Q96KT0 104 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 BET1LQ9NYM9 111 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 UQCR10Q9UDW1 63 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 DIP2CQ9Y2E4 1556 aa1.71□□□□□ -2.14
VRK1-205ENST00000555402 MRC1P22897 1456 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 MAGI2Q86UL8 1455 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 MLH3Q9UHC1 1453 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 K7EP34 96 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 EDDM3BP56851 147 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 ELOF1P60002 83 aaKnown RBP1.7□□□□□ -2.14
VRK1-205ENST00000555402 UBE2D3P61077 147 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 UBE2D2P62837 147 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 ARHGEF5Q12774 1597 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 CEP162Q5TB80 1403 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 Q6ZQY7 126 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 LENEPQ9Y5L5 61 aa1.7□□□□□ -2.14
VRK1-205ENST00000555402 UACAQ9BZF9 1416 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 CHKB-CPT1BH3BT56 60 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 NDUFC1O43677 76 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 PPP1R17O96001 155 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 APOC3P02656 99 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 Q5VV11 94 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 Q86TA4 180 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 Q8N6K4 173 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 SERP2Q8N6R1 65 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 TRGV9Q99603 122 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 DYNLRB1Q9NP97 96 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 PRO1854Q9UHT4 67 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 SCN7AQ01118 1682 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 MYO3AQ8NEV4 1616 aa1.69□□□□□ -2.14
VRK1-205ENST00000555402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.68□□□□□ -2.14
VRK1-205ENST00000555402 TRAV22A0A0B4J277 110 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 CAV3P56539 151 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 KLKP1Q107X0 134 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 C20orf78Q9BR46 151 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 CACFD1Q9UGQ2 172 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 V9GYV3 84 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 DLG5Q8TDM6 1919 aa1.68□□□□□ -2.14
VRK1-205ENST00000555402 SNRNP200O75643 2136 aaKnown RBP1.67□□□□□ -2.14
VRK1-205ENST00000555402 TET1Q8NFU7 2136 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 EHBP1L1Q8N3D4 1523 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 A0A087WTM6 91 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 UQCRHLA0A096LP55 91 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 A0A0G2JND7 137 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 A0A1W2PPM0 123 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 SYS1-DBNDD2H3BUS1 97 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 CYB5AP00167 134 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 COX6CP09669 75 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 TRAPPC2P0DI81 140 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 TRAPPC2BP0DI82 140 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 SPAG11BQ08648 103 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 PEA15Q15121 130 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 SPAG11AQ6PDA7 123 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 SFTA2Q6UW10 78 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 CCL19Q99731 98 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 V9GYH0 126 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms