RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 COTL1Q14019 142 aa5.82□□□□□ -1.48
AC004828.1-201ENST00000555303 RPP21Q9H633 154 aaKnown RBP5.82□□□□□ -1.48
AC004828.1-201ENST00000555303 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 AMTP48728 403 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 RPL37AP61513 92 aaKnown RBP5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 TEX261Q6UWH6 196 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 SMIM15Q7Z3B0 74 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 C20orf203Q8NBC4 194 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 NUDT10Q8NFP7 164 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 NUDT11Q96G61 164 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 AP5S1Q9NUS5 200 aa5.81□□□□□ -1.48
AC004828.1-201ENST00000555303 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 hDV102S1A0JD36 115 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 TMEM250H0YL14 139 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 H7C423 109 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 NCR2O95944 276 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 CIRBPQ14011 172 aaKnown RBP5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 TWIST1Q15672 202 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 RNF185Q96GF1 192 aa5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
AC004828.1-201ENST00000555303 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 IGLV4-60A0A075B6I1 120 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 SERTAD4-AS1Q5TG53 156 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 FAM231DQ6ZW35 169 aa5.79□□□□□ -1.48
AC004828.1-201ENST00000555303 K7EN84 100 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 NDUFS6O75380 124 aaKnown RBP5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 ZNF25P17030 456 aaPredicted RBP5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 BLOC1S1P78537 153 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 C4orf48Q5BLP8 95 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 CT83Q5H943 113 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 CFAP161Q6P656 301 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 OCC1Q8TAD7 63 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 GFRA4Q9GZZ7 299 aa5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 RNASE7Q9H1E1 156 aaKnown RBP5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
AC004828.1-201ENST00000555303 A8MWL6 223 aa5.77□□□□□ -1.49
AC004828.1-201ENST00000555303 APCSP02743 223 aa5.77□□□□□ -1.49
AC004828.1-201ENST00000555303 AMMECR1LQ6DCA0 310 aa5.77□□□□□ -1.49
AC004828.1-201ENST00000555303 GTSF1Q8WW33 167 aa5.77□□□□□ -1.49
AC004828.1-201ENST00000555303 TRAV26-2A0A0B4J265 109 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 SDHAF1A6NFY7 115 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 GATCO43716 136 aaKnown RBP5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 FOXA3P55318 350 aaPredicted RBP5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 AKAP14Q86UN6 197 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 C15orf56Q8N910 161 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 LYPD6BQ8NI32 183 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 BORCS7Q96B45 105 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 PKIGQ9Y2B9 76 aa5.76□□□□□ -1.49
AC004828.1-201ENST00000555303 FAM231BA6NCW3 169 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 PANO1I0J062 215 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 I3L3M4 83 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 Q6ZNX1 250 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
AC004828.1-201ENST00000555303 GVQW2A0A096LPI5 108 aaPredicted RBP5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 A0A1B0GUT8 65 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 FGF6P10767 208 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 RPS10P46783 165 aaKnown RBP5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 RNASEKQ6P5S7 137 aaKnown RBP5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 ALKAL2Q6UX46 152 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 Q6ZRU5 148 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 OR5A1Q8NGJ0 315 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 CHCHD10Q8WYQ3 142 aaPredicted RBP5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 TMEM101Q96IK0 257 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 PLAC8Q9NZF1 115 aa5.74□□□□□ -1.49
AC004828.1-201ENST00000555303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 A0A087WYN8 130 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 A0A1B0GVG6 124 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 IGKV2-29A2NJV5 120 aaPredicted RBP5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 SLPIP03973 132 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 PMCHP20382 165 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 C7orf33Q8WU49 177 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 TSKUQ8WUA8 353 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 MRAP2Q96G30 205 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 SMIM7Q9BQ49 75 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 ST20Q9HBF5 79 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 OSTCQ9NRP0 149 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
AC004828.1-201ENST00000555303 IGKV3OR2-268A0A0C4DH90 116 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 HIGD1CA8MV81 97 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 PPP1R17O96001 155 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 ESDP10768 282 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 CEBPGP53567 150 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 SMAGPQ0VAQ4 97 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 FOXI1Q12951 378 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 MRPL52Q86TS9 123 aaKnown RBP5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 LINC01551Q86U37 167 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 DPH3Q96FX2 82 aa5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 EIF5A2Q9GZV4 153 aaKnown RBP5.72□□□□□ -1.49
AC004828.1-201ENST00000555303 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms