RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
PTPN21-207ENST00000555243 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
PTPN21-207ENST00000555243 NUDT10Q8NFP7 164 aa8.75□□□□□ -1.01
PTPN21-207ENST00000555243 NUDT11Q96G61 164 aa8.75□□□□□ -1.01
PTPN21-207ENST00000555243 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 CTRLP40313 264 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
PTPN21-207ENST00000555243 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
PTPN21-207ENST00000555243 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 CFAP161Q6P656 301 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
PTPN21-207ENST00000555243 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
PTPN21-207ENST00000555243 TRBV20OR9-2A0A075B6H5 130 aa8.73□□□□□ -1.01
PTPN21-207ENST00000555243 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
PTPN21-207ENST00000555243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
PTPN21-207ENST00000555243 IGKV3OR2-268A0A0C4DH90 116 aa8.72□□□□□ -1.01
PTPN21-207ENST00000555243 TEX261Q6UWH6 196 aa8.71□□□□□ -1.02
PTPN21-207ENST00000555243 TCTE3Q8IZS6 198 aa8.71□□□□□ -1.02
PTPN21-207ENST00000555243 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
PTPN21-207ENST00000555243 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
PTPN21-207ENST00000555243 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
PTPN21-207ENST00000555243 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 NCR2O95944 276 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 APCSP02743 223 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
PTPN21-207ENST00000555243 GATD1Q8NB37 220 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 CNFNQ9BYD5 112 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
PTPN21-207ENST00000555243 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
PTPN21-207ENST00000555243 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
PTPN21-207ENST00000555243 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
PTPN21-207ENST00000555243 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
PTPN21-207ENST00000555243 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
PTPN21-207ENST00000555243 A8MWL6 223 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 H7C423 109 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 PANO1I0J062 215 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 PMCHP20382 165 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
PTPN21-207ENST00000555243 TMEM250H0YL14 139 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 K7EN84 100 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
PTPN21-207ENST00000555243 CEBPGP53567 150 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 CIRBPQ14011 172 aaKnown RBP8.67□□□□□ -1.02
PTPN21-207ENST00000555243 C7orf33Q8WU49 177 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
PTPN21-207ENST00000555243 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
PTPN21-207ENST00000555243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
PTPN21-207ENST00000555243 A0A087WYN8 130 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
PTPN21-207ENST00000555243 SDHAF1A6NFY7 115 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 FGF6P10767 208 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
PTPN21-207ENST00000555243 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 Q6ZNX1 250 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 CHCHD10Q8WYQ3 142 aaPredicted RBP8.66□□□□□ -1.02
PTPN21-207ENST00000555243 PKIGQ9Y2B9 76 aa8.66□□□□□ -1.02
PTPN21-207ENST00000555243 I3L3M4 83 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 Q6ZRU5 148 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 SPACA4Q8TDM5 124 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
PTPN21-207ENST00000555243 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
PTPN21-207ENST00000555243 SLPIP03973 132 aa8.64□□□□□ -1.03
PTPN21-207ENST00000555243 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
PTPN21-207ENST00000555243 FAM210AQ96ND0 272 aa8.64□□□□□ -1.03
PTPN21-207ENST00000555243 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
PTPN21-207ENST00000555243 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
PTPN21-207ENST00000555243 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
PTPN21-207ENST00000555243 COX6A2Q02221 97 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 CT83Q5H943 113 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 AKAP14Q86UN6 197 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
PTPN21-207ENST00000555243 IGKV2-24A0A0C4DH68 120 aa8.62□□□□□ -1.03
PTPN21-207ENST00000555243 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
PTPN21-207ENST00000555243 XCL1P47992 114 aa8.62□□□□□ -1.03
PTPN21-207ENST00000555243 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
PTPN21-207ENST00000555243 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
PTPN21-207ENST00000555243 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
PTPN21-207ENST00000555243 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
PTPN21-207ENST00000555243 SS18Q15532 418 aa8.61□□□□□ -1.03
PTPN21-207ENST00000555243 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
PTPN21-207ENST00000555243 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
PTPN21-207ENST00000555243 IGHV1-58A0A0C4DH39 117 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 PHOX2AO14813 284 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 CCL25O15444 150 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 PRSS3P2Q8NHM4 247 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
PTPN21-207ENST00000555243 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
PTPN21-207ENST00000555243 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms