RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 FOXA3P55318 350 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 COX6A2Q02221 97 aa6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 NIT2Q9NQR4 276 aa6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
HNRNPC-218ENST00000555215 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 A0A0D9SG52 128 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 CACNG7P62955 275 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 RGS21Q2M5E4 152 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 GATD1Q8NB37 220 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
HNRNPC-218ENST00000555215 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 KANTRA0A1W2PQU2 76 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 H7C1H1 209 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 AMTP48728 403 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 Q6ZNX1 250 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 C9orf62Q8N4C0 152 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 DPH3P1Q9H4G8 78 aa6.32□□□□□ -1.4
HNRNPC-218ENST00000555215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 IGKV2-29A2NJV5 120 aaPredicted RBP6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 IFNA1P01562 189 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 GNG4P50150 75 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 SULT1A2P50226 295 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 LINC00526Q96FQ7 95 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 RNF185Q96GF1 192 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 AP5S1Q9NUS5 200 aa6.31□□□□□ -1.4
HNRNPC-218ENST00000555215 A0A096LNI7 61 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 F2Z2F3 143 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 K7EN84 100 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 CTRLP40313 264 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 RPS10P46783 165 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 COTL1Q14019 142 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 GTSF1Q8WW33 167 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 CHCHD10Q8WYQ3 142 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 RNASE7Q9H1E1 156 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
HNRNPC-218ENST00000555215 FAM231BA6NCW3 169 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 UBE2L6O14933 153 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 TRGC1P0CF51 173 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 MEF2BQ02080 365 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 FOXI1Q12951 378 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 TWIST1Q15672 202 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 LINC01600Q96MT4 127 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 CNFNQ9BYD5 112 aa6.29□□□□□ -1.4
HNRNPC-218ENST00000555215 GVQW2A0A096LPI5 108 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-218ENST00000555215 NDUFS6O75380 124 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-218ENST00000555215 WDR73Q6P4I2 378 aa6.28□□□□□ -1.4
HNRNPC-218ENST00000555215 STPG4Q8N801 248 aa6.28□□□□□ -1.4
HNRNPC-218ENST00000555215 BCL2P10415 239 aa6.27□□□□□ -1.41
HNRNPC-218ENST00000555215 FGF6P10767 208 aa6.27□□□□□ -1.41
HNRNPC-218ENST00000555215 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
HNRNPC-218ENST00000555215 RNASEKQ6P5S7 137 aaKnown RBP6.27□□□□□ -1.41
HNRNPC-218ENST00000555215 SMIM12Q96EX1 92 aa6.27□□□□□ -1.41
HNRNPC-218ENST00000555215 LPAP08519 4548 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 XKRY2A2RUG3 117 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 PDE6DO43924 150 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 XCL1P47992 114 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 EIF5AP63241 154 aaKnown RBP6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.414e-16■■■□□ 16.3
HNRNPC-218ENST00000555215 CFAP161Q6P656 301 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
HNRNPC-218ENST00000555215 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
HNRNPC-218ENST00000555215 TSHBP01222 138 aa6.25□□□□□ -1.41
HNRNPC-218ENST00000555215 AMMECR1LQ6DCA0 310 aa6.25□□□□□ -1.41
HNRNPC-218ENST00000555215 A0A0J9YXV3 536 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 CCL25O15444 150 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 APCSP02743 223 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 ESDP10768 282 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 OR5A1Q8NGJ0 315 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 TMEM242Q9NWH2 141 aa6.24□□□□□ -1.41
HNRNPC-218ENST00000555215 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
HNRNPC-218ENST00000555215 NCR2O95944 276 aa6.23□□□□□ -1.41
HNRNPC-218ENST00000555215 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
HNRNPC-218ENST00000555215 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 H7C423 109 aa6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 I3L3M4 83 aa6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 PMCHP20382 165 aa6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 POLR2KP53803 58 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
HNRNPC-218ENST00000555215 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
HNRNPC-218ENST00000555215 TEX46H3BTG2 121 aa6.21□□□□□ -1.42
HNRNPC-218ENST00000555215 GATCO43716 136 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-218ENST00000555215 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
HNRNPC-218ENST00000555215 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
HNRNPC-218ENST00000555215 SMKR1H3BMG3 65 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms