RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 Q8N8P6 123 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 SMIM2Q9BVW6 85 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 K7EMI3 77 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 TSHBP01222 138 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 DEFB104AQ8WTQ1 72 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 Q9H8V8 135 aa6.98□□□□□ -1.29
SYNE2-215ENST00000554997 NXT2Q9NPJ8 142 aaKnown RBP6.98□□□□□ -1.29
SYNE2-215ENST00000554997 LY6G6CO95867 125 aa6.97□□□□□ -1.29
SYNE2-215ENST00000554997 ESDP10768 282 aa6.97□□□□□ -1.29
SYNE2-215ENST00000554997 FCER1GP30273 86 aa6.97□□□□□ -1.29
SYNE2-215ENST00000554997 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-215ENST00000554997 AMTP48728 403 aa6.97□□□□□ -1.29
SYNE2-215ENST00000554997 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
SYNE2-215ENST00000554997 LINC01546A6NGU7 62 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 H7C423 109 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 SIVA1O15304 175 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 NIT1Q86X76 327 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 C18orf32Q8TCD1 76 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 CHCHD5Q9BSY4 110 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 RYR2Q92736 4967 aa6.96□□□□□ -1.3
SYNE2-215ENST00000554997 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 K7EP13 123 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 LINC00614P0C842 121 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 DNAH10OSP0CZ25 163 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-215ENST00000554997 PKIAP61925 76 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 Q0VG73 95 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
SYNE2-215ENST00000554997 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 LCE6AA0A183 80 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 G0S2P27469 103 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 RAB5BP61020 215 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 LAGE3Q14657 143 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 ORMDL2Q53FV1 153 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 LINC01556Q5JQF7 62 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 C20orf203Q8NBC4 194 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 DNAH1Q9P2D7 4330 aa6.94□□□□□ -1.3
SYNE2-215ENST00000554997 A0A087WX48 190 aa6.93□□□□□ -1.3
SYNE2-215ENST00000554997 UBE2L6O14933 153 aa6.93□□□□□ -1.3
SYNE2-215ENST00000554997 GAGE6Q13070 117 aa6.93□□□□□ -1.3
SYNE2-215ENST00000554997 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
SYNE2-215ENST00000554997 URB1-AS1Q96HZ7 61 aa6.93□□□□□ -1.3
SYNE2-215ENST00000554997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-215ENST00000554997 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-215ENST00000554997 FGF6P10767 208 aa6.92□□□□□ -1.3
SYNE2-215ENST00000554997 MRPL52Q86TS9 123 aaKnown RBP6.92□□□□□ -1.3
SYNE2-215ENST00000554997 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
SYNE2-215ENST00000554997 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
SYNE2-215ENST00000554997 NBDYA0A0U1RRE5 68 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 C1orf196B1AJZ1 125 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BKO60814 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BJP06899 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BOP23527 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 RBX1P62877 108 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-215ENST00000554997 AMMECR1LQ6DCA0 310 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 CHCHD1Q96BP2 118 aaKnown RBP6.91□□□□□ -1.3
SYNE2-215ENST00000554997 LYSTQ99698 3801 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
SYNE2-215ENST00000554997 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 ZNF25P17030 456 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-215ENST00000554997 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 Q8N976 141 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.3
SYNE2-215ENST00000554997 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
SYNE2-215ENST00000554997 RPL39P62891 51 aaKnown RBP6.89□□□□□ -1.31
SYNE2-215ENST00000554997 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
SYNE2-215ENST00000554997 Q6ZR54 194 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 Q8N3U1 123 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms