RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IGKV4-1P06312 121 aa10.54□□□□□ -0.72
VTI1B-204ENST00000554659 MRPL55Q7Z7F7 128 aaKnown RBP10.54□□□□□ -0.72
VTI1B-204ENST00000554659 SPG11Q96JI7 2443 aa10.54□□□□□ -0.72
VTI1B-204ENST00000554659 SPANXB1Q9NS25 103 aaPredicted RBP10.54□□□□□ -0.72
VTI1B-204ENST00000554659 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
VTI1B-204ENST00000554659 DEFB4AO15263 64 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 Q8NA96 180 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 A0A0U1RQV1 116 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 IGF1P05019 195 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 TNFRSF13BO14836 293 aaPredicted RBP10.53□□□□□ -0.72
VTI1B-204ENST00000554659 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
VTI1B-204ENST00000554659 F8W735 103 aaPredicted RBP10.52□□□□□ -0.72
VTI1B-204ENST00000554659 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.72
VTI1B-204ENST00000554659 LTBP2Q14767 1821 aa10.52□□□□□ -0.73
VTI1B-204ENST00000554659 SONP18583 2426 aaKnown RBP10.52□□□□□ -0.73
VTI1B-204ENST00000554659 CRIP1P50238 77 aa10.52□□□□□ -0.73
VTI1B-204ENST00000554659 LMO4P61968 165 aa10.52□□□□□ -0.73
VTI1B-204ENST00000554659 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
VTI1B-204ENST00000554659 FREM1Q5H8C1 2179 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 ARHGAP21Q5T5U3 1957 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 EBI3Q14213 229 aa10.51□□□□□ -0.73
VTI1B-204ENST00000554659 DEFB135Q30KP9 77 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 ADAMTS9Q9P2N4 1935 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 RNF185Q96GF1 192 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 LY6LH3BQJ8 138 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 K7EQG2 157 aa10.5□□□□□ -0.73
VTI1B-204ENST00000554659 ZNF22P17026 224 aaPredicted RBP10.5□□□□□ -0.73
VTI1B-204ENST00000554659 FAM240AA0A1B0GVK7 77 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 NRGNQ92686 78 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 ALPK3Q96L96 1907 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 P0DMU3 169 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 C20orf173Q96LM9 149 aa10.49□□□□□ -0.73
VTI1B-204ENST00000554659 COL4A4P53420 1690 aaPredicted RBP10.49□□□□□ -0.73
VTI1B-204ENST00000554659 TNRC6BQ9UPQ9 1833 aaKnown RBP10.49□□□□□ -0.73
VTI1B-204ENST00000554659 IGLV2-11P01706 119 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 MAPKAPK5-AS1Q8N8E1 139 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 GOLGB1Q14789 3259 aaKnown RBP10.48□□□□□ -0.73
VTI1B-204ENST00000554659 BDP1A6H8Y1 2624 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
VTI1B-204ENST00000554659 ACACBO00763 2458 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 H7C423 109 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 SMAD5-AS1Q9Y6J3 95 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 INSL3P51460 131 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 CDKN2A-AS1Q9UH64 79 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 CSPG4Q6UVK1 2322 aa10.47□□□□□ -0.73
VTI1B-204ENST00000554659 SLPIP03973 132 aa10.46□□□□□ -0.73
VTI1B-204ENST00000554659 TRBV30A0A0K0K1B3 111 aa10.46□□□□□ -0.74
VTI1B-204ENST00000554659 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.74
VTI1B-204ENST00000554659 A0A096LNI7 61 aa10.46□□□□□ -0.74
VTI1B-204ENST00000554659 Q6ZTI0 123 aa10.46□□□□□ -0.74
VTI1B-204ENST00000554659 M0QY20 66 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 CASC2Q6XLA1 102 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 C22orf34Q6ZV56 151 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 MYO18BQ8IUG5 2567 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
VTI1B-204ENST00000554659 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
VTI1B-204ENST00000554659 C2orf91Q6ZV80 131 aa10.44□□□□□ -0.74
VTI1B-204ENST00000554659 B9D2Q9BPU9 175 aa10.44□□□□□ -0.74
VTI1B-204ENST00000554659 RBX1P62877 108 aa10.44□□□□□ -0.74
VTI1B-204ENST00000554659 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 TRIAP1O43715 76 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
VTI1B-204ENST00000554659 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
VTI1B-204ENST00000554659 V9GYY9 64 aa10.42□□□□□ -0.74
VTI1B-204ENST00000554659 DNAJC9-AS1A6NH13 148 aa10.42□□□□□ -0.74
VTI1B-204ENST00000554659 NRACQ8N912 160 aa10.42□□□□□ -0.74
VTI1B-204ENST00000554659 PIK3CD-AS1Q5SR53 167 aa10.41□□□□□ -0.74
VTI1B-204ENST00000554659 REG3AQ06141 175 aa10.41□□□□□ -0.74
VTI1B-204ENST00000554659 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
VTI1B-204ENST00000554659 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
VTI1B-204ENST00000554659 Q6YL49 198 aa10.41□□□□□ -0.74
VTI1B-204ENST00000554659 MED12LQ86YW9 2145 aa10.4□□□□□ -0.74
VTI1B-204ENST00000554659 MRPS12O15235 138 aaKnown RBP10.4□□□□□ -0.74
VTI1B-204ENST00000554659 TIMM17BO60830 172 aa10.4□□□□□ -0.74
VTI1B-204ENST00000554659 PRR14LQ5THK1 2151 aa10.4□□□□□ -0.74
VTI1B-204ENST00000554659 NUP210LQ5VU65 1888 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms