RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 IGHV3-73A0A0B4J1V6 119 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 MUC21A0A0G2JKD1 596 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 MUC21A0A140T8X8 626 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 K7EP13 123 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 ZNF664Q8N3J9 261 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 Q8N976 141 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 OR10AG1Q8NH19 301 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 SCRT2Q9NQ03 307 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 MSRB1Q9NZV6 116 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 PHLDA3Q9Y5J5 127 aa8.93□□□□□ -0.98
SHMT2-211ENST00000554310 IGHV1-24A0A0C4DH33 117 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 LINC00587B1AMM8 73 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 RHODO00212 210 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 CKS2P33552 79 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 TNP2Q05952 138 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
SHMT2-211ENST00000554310 LINC00315P59091 139 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 SSTP61278 116 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 SPANXN1Q5VSR9 72 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
SHMT2-211ENST00000554310 TRAV9-2A0A087WT02 112 aa8.9□□□□□ -0.98
SHMT2-211ENST00000554310 NPYP01303 97 aa8.9□□□□□ -0.98
SHMT2-211ENST00000554310 DNAH10OSP0CZ25 163 aa8.9□□□□□ -0.98
SHMT2-211ENST00000554310 UFSP1Q6NVU6 142 aa8.9□□□□□ -0.98
SHMT2-211ENST00000554310 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
SHMT2-211ENST00000554310 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 M0R381 172 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 EVI2AP22794 236 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 DDTP30046 118 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 JPT2Q9H910 190 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 HERC2O95714 4834 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 KIAA1109Q2LD37 5005 aa8.89□□□□□ -0.99
SHMT2-211ENST00000554310 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 PRSS47A8MTI9 375 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 LINC00694P0DN24 101 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-211ENST00000554310 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-211ENST00000554310 Q6ZSN1 163 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 NFE4Q86UQ8 179 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 C10orf126Q8N4M7 172 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 ATP6V0E2Q8NHE4 81 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 MRAP2Q96G30 205 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 TMEM70Q9BUB7 260 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 VAMP8Q9BV40 100 aa8.88□□□□□ -0.99
SHMT2-211ENST00000554310 DYNC1H1Q14204 4646 aaKnown RBP8.87□□□□□ -0.99
SHMT2-211ENST00000554310 IGHV3-38A0A0C4DH36 116 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 NCR2O95944 276 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 LELP1Q5T871 98 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 GTSF1LQ9H1H1 148 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 DPH3P1Q9H4G8 78 aa8.87□□□□□ -0.99
SHMT2-211ENST00000554310 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
SHMT2-211ENST00000554310 A0A087WWL8 130 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 LOC389332A0A1B0GUA5 103 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 SYS1-DBNDD2H3BUS1 97 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 LINC01556Q5JQF7 62 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 MAP1LC3CQ9BXW4 147 aa8.86□□□□□ -0.99
SHMT2-211ENST00000554310 A0A096LNJ9 63 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 C20orf202A1L168 122 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 HBDP02042 147 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 CRYGDP07320 174 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 GAGE1Q13065 139 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 GAGE4Q13068 117 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 GAGE5Q13069 117 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 C14orf178Q8N769 122 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-211ENST00000554310 NRACQ8N912 160 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
SHMT2-211ENST00000554310 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
SHMT2-211ENST00000554310 LINC00173Q6ZV60 143 aa8.84□□□□□ -0.99
SHMT2-211ENST00000554310 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
SHMT2-211ENST00000554310 Q8N8P6 123 aa8.84□□□□□ -0.99
SHMT2-211ENST00000554310 C16orf90A8MZG2 172 aa8.83□□□□□ -1
SHMT2-211ENST00000554310 GAS8-AS1O95177 125 aa8.83□□□□□ -1
SHMT2-211ENST00000554310 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
SHMT2-211ENST00000554310 PPP1R17O96001 155 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 CTAG1AP78358 180 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 ZNF56Q15929 161 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 SPATA45Q537H7 98 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 LINC01545Q5VT33 79 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 C20orf78Q9BR46 151 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 Q9UF83 564 aa8.82□□□□□ -1
SHMT2-211ENST00000554310 KIF25-AS1Q9Y6Z4 181 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms