RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MRPL23Q16540 153 aaKnown RBP5.35□□□□□ -1.55
TDP1-209ENST00000554180 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 NEGR1Q7Z3B1 354 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 ICOSQ9Y6W8 199 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
TDP1-209ENST00000554180 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 A0A096LNJ9 63 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 DEFB131BA0A096LNP1 70 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 LOC100131303A0A0U1RQF7 123 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 NUDT3O95989 172 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 FABP4P15090 132 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 FAM19A2Q8N3H0 131 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 ATP6V0E2Q8NHE4 81 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 TOMM6Q96B49 74 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
TDP1-209ENST00000554180 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 IGHV3-38A0A0C4DH36 116 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 A0A0J9YY99 117 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 LEPROTL1O95214 131 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 NPSP0C0P6 89 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 BTF3P20290 206 aaKnown RBP5.33□□□□□ -1.56
TDP1-209ENST00000554180 TIRAPP58753 221 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 PMCHL1Q16048 86 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 C2orf66Q6UXQ4 117 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
TDP1-209ENST00000554180 PHLDA1Q8WV24 401 aaPredicted RBP5.33□□□□□ -1.56
TDP1-209ENST00000554180 TRBV25-1A0A075B6N4 114 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 A0A096LPF7 62 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 H7C423 109 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 ATP5LO75964 103 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 TIMM17AQ99595 171 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 CHCHD7Q9BUK0 85 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 SPANXA1Q9NS26 97 aa5.32□□□□□ -1.56
TDP1-209ENST00000554180 LOC105371267A0A1B0GV96 52 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.31□□□□□ -1.56
TDP1-209ENST00000554180 NTM-AS1Q6ZSK4 140 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 ERASQ7Z444 233 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 OR10D4PQ8NGN7 298 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 TMEM141Q96I45 108 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 TMEM243Q9BU79 118 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 TIMM21Q9BVV7 248 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
TDP1-209ENST00000554180 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 ZNF25P17030 456 aaPredicted RBP5.3□□□□□ -1.56
TDP1-209ENST00000554180 PKIAP61925 76 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 RPL39P62891 51 aaKnown RBP5.3□□□□□ -1.56
TDP1-209ENST00000554180 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 LELP1Q5T871 98 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 SPATA12Q7Z6I5 190 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 MRPL52Q86TS9 123 aaKnown RBP5.3□□□□□ -1.56
TDP1-209ENST00000554180 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 MAP1LC3CQ9BXW4 147 aa5.3□□□□□ -1.56
TDP1-209ENST00000554180 CSDC2Q9Y534 153 aaKnown RBP5.3□□□□□ -1.56
TDP1-209ENST00000554180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.29□□□□□ -1.56
TDP1-209ENST00000554180 IGKV2-29A2NJV5 120 aaPredicted RBP5.29□□□□□ -1.56
TDP1-209ENST00000554180 NUPR2A6NF83 97 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 UBE2L6O14933 153 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 C3orf79P0CE67 100 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 AKR1D1P51857 326 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 TCTAP57738 103 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
TDP1-209ENST00000554180 PET117Q6UWS5 81 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
TDP1-209ENST00000554180 TRAV12-1A0A0B4J245 112 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 A0A1B0GUV1 79 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 C20orf202A1L168 122 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 SYS1-DBNDD2H3BUS1 97 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 FGF6P10767 208 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 KRTDAPP60985 99 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 CEMP1Q6PRD7 247 aaPredicted RBP5.28□□□□□ -1.56
TDP1-209ENST00000554180 LYPD5Q6UWN5 251 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 Q6ZN92 141 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 CHCHD5Q9BSY4 110 aa5.28□□□□□ -1.56
TDP1-209ENST00000554180 IGLV4-3A0A075B6K6 122 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 TRAV8-6A0A0B4J262 113 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 IGLL5B9A064 214 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 SMIM6P0DI80 62 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
TDP1-209ENST00000554180 LINC01545Q5VT33 79 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 AMMECR1LQ6DCA0 310 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 LGALS9CQ6DKI2 356 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 OR5A1Q8NGJ0 315 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 BAALCQ8WXS3 180 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 TMEM101Q96IK0 257 aa5.27□□□□□ -1.57
TDP1-209ENST00000554180 KLK5Q9Y337 293 aaPredicted RBP5.27□□□□□ -1.57
TDP1-209ENST00000554180 PRSS1P07477 247 aa5.26□□□□□ -1.57
TDP1-209ENST00000554180 PMVKQ15126 192 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms