RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PLAC8Q9NZF1 115 aa5.17□□□□□ -1.58
ACTN1-212ENST00000554158 VAX2Q9UIW0 290 aa5.17□□□□□ -1.58
ACTN1-212ENST00000554158 IGKV3OR2-268A0A0C4DH90 116 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 NDUFS6O75380 124 aaKnown RBP5.16□□□□□ -1.58
ACTN1-212ENST00000554158 RPS10P46783 165 aaKnown RBP5.16□□□□□ -1.58
ACTN1-212ENST00000554158 FHITP49789 147 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 COX6A2Q02221 97 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 NTM-AS1Q6ZSK4 140 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 STPG4Q8N801 248 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 TPPP3Q9BW30 176 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 MED28Q9H204 178 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 LINC00474Q9P2X8 69 aa5.16□□□□□ -1.58
ACTN1-212ENST00000554158 FXYD6-FXYD2A0A087WZ82 144 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 A0A0J9YXV3 536 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 A0A1B0GUV1 79 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 OR5AL1P0C617 328 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 AMTP48728 403 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 PRR3P79522 188 aaKnown RBP5.15□□□□□ -1.59
ACTN1-212ENST00000554158 ZNF726P1Q15940 193 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 AMMECR1LQ6DCA0 310 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 RPL7L1Q6DKI1 246 aaKnown RBP5.15□□□□□ -1.59
ACTN1-212ENST00000554158 KRTAP26-1Q6PEX3 210 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 SPINK6Q6UWN8 80 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 BAGE2Q86Y30 109 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 BATF3Q9NR55 127 aa5.15□□□□□ -1.59
ACTN1-212ENST00000554158 SNAI2O43623 268 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 PAGE4O60829 102 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 NKX2-5P52952 324 aaPredicted RBP5.14□□□□□ -1.59
ACTN1-212ENST00000554158 COTL1Q14019 142 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 HIGD2BQ4VC39 106 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 C20orf203Q8NBC4 194 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 ALG5Q9Y673 324 aa5.14□□□□□ -1.59
ACTN1-212ENST00000554158 IGLV4-60A0A075B6I1 120 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 XKRY2A2RUG3 117 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 PRYO14603 147 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 GAS8-AS1O95177 125 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 TRGC1P0CF51 173 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 RPS20P60866 119 aaKnown RBP5.13□□□□□ -1.59
ACTN1-212ENST00000554158 CACNG7P62955 275 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 RASL11AQ6T310 242 aa5.13□□□□□ -1.59
ACTN1-212ENST00000554158 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 IFITM3Q01628 133 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 SUMO4Q6EEV6 95 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 RNASEKQ6P5S7 137 aaKnown RBP5.12□□□□□ -1.59
ACTN1-212ENST00000554158 Q6ZRP5 223 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 FER1L6-AS1Q8NA97 138 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 PRSS3P2Q8NHM4 247 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 PGLYRP4Q96LB8 373 aa5.12□□□□□ -1.59
ACTN1-212ENST00000554158 A0A1B0GV50 99 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 M0QY20 66 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 SLPIP03973 132 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 GIPP09681 153 aaPredicted RBP5.11□□□□□ -1.59
ACTN1-212ENST00000554158 Q6ZNX1 250 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 C15orf56Q8N910 161 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 SFT2D1Q8WV19 159 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 CHCHD10Q8WYQ3 142 aaPredicted RBP5.11□□□□□ -1.59
ACTN1-212ENST00000554158 BTF3L4Q96K17 158 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 NIT2Q9NQR4 276 aa5.11□□□□□ -1.59
ACTN1-212ENST00000554158 F2Z2F3 143 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 TMUB2Q71RG4 321 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 KCNRGQ8N5I3 272 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 OR2D3Q8NGH3 330 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 FAM213BQ8TBF2 198 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 TMEM101Q96IK0 257 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 GFRA4Q9GZZ7 299 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 LRP2P98164 4655 aa5.1□□□□□ -1.59
ACTN1-212ENST00000554158 A0A096LNI7 61 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 GVQW2A0A096LPI5 108 aaPredicted RBP5.09□□□□□ -1.59
ACTN1-212ENST00000554158 TRAV26-2A0A0B4J265 109 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 IFNA1P01562 189 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 APCSP02743 223 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 SMIM15Q7Z3B0 74 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 ISOC2Q96AB3 205 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 CARD19Q96LW7 228 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 BIN3Q9NQY0 253 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 TNXBP22105 4242 aa5.09□□□□□ -1.59
ACTN1-212ENST00000554158 IGHV1-58A0A0C4DH39 117 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 UMAD1C9J7I0 102 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 H7C423 109 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 ARPC5O15511 151 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 NCR2O95944 276 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 MT-ND6P03923 174 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 RPL35P42766 123 aaKnown RBP5.08□□□□□ -1.6
ACTN1-212ENST00000554158 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 ZNF664Q8N3J9 261 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 MLST8Q9BVC4 326 aa5.08□□□□□ -1.6
ACTN1-212ENST00000554158 A0A0U1RQV1 116 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 TEX46H3BTG2 121 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 XCL1P47992 114 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 GNG4P50150 75 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 SS18Q15532 418 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 TWIST1Q15672 202 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 Q5BKY6 102 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 MANBALQ9NQG1 85 aa5.07□□□□□ -1.6
ACTN1-212ENST00000554158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
ACTN1-212ENST00000554158 LOC107984640A0A0U1RRK4 108 aa5.06□□□□□ -1.6
ACTN1-212ENST00000554158 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
ACTN1-212ENST00000554158 IGLC6P0CF74 106 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms