RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 C2CD3Q4AC94 2353 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 CD28P10747 220 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 RHODO00212 210 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 CFC1P0CG37 223 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 Q96MF0 132 aa10.64□□□□□ -0.71
ACTN1-211ENST00000553882 ADARB2-AS1A8MUL3 147 aa10.63□□□□□ -0.71
ACTN1-211ENST00000553882 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
ACTN1-211ENST00000553882 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
ACTN1-211ENST00000553882 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
ACTN1-211ENST00000553882 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-211ENST00000553882 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-211ENST00000553882 LINC01587Q99440 93 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 TRAV2A0A0B4J234 112 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 M0R2P5 195 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 DEFB113Q30KQ7 82 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
ACTN1-211ENST00000553882 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 LEPROTO15243 131 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 MTORP42345 2549 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 ACANP16112 2415 aa10.61□□□□□ -0.71
ACTN1-211ENST00000553882 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-211ENST00000553882 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-211ENST00000553882 A8MWV9 139 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 H7C2G1 150 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-211ENST00000553882 UBE2D3P61077 147 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 UBE2D2P62837 147 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
ACTN1-211ENST00000553882 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 J3QR89 54 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 PTH2Q96A98 100 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 A0A1W2PRX2 142 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 Q8N2B8 174 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 CITED1Q99966 193 aa10.59□□□□□ -0.71
ACTN1-211ENST00000553882 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
ACTN1-211ENST00000553882 TCL1BO95988 128 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 DEFB114Q30KQ6 69 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 ZNF843Q8N446 348 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 A8MTW9 85 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 A8MZ25 164 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 SCGB1C2P0DMR2 95 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
ACTN1-211ENST00000553882 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-211ENST00000553882 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
ACTN1-211ENST00000553882 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
ACTN1-211ENST00000553882 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
ACTN1-211ENST00000553882 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
ACTN1-211ENST00000553882 AZU1P20160 251 aa10.56□□□□□ -0.72
ACTN1-211ENST00000553882 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
ACTN1-211ENST00000553882 CHCHD7Q9BUK0 85 aa10.56□□□□□ -0.72
ACTN1-211ENST00000553882 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
ACTN1-211ENST00000553882 MRPS36P82909 103 aaKnown RBP10.56□□□□□ -0.72
ACTN1-211ENST00000553882 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
ACTN1-211ENST00000553882 INSP01308 110 aa10.55□□□□□ -0.72
ACTN1-211ENST00000553882 Q6ZUT4 128 aa10.55□□□□□ -0.72
ACTN1-211ENST00000553882 Q6ZSV7 163 aa10.55□□□□□ -0.72
ACTN1-211ENST00000553882 UBE2D4Q9Y2X8 147 aa10.55□□□□□ -0.72
ACTN1-211ENST00000553882 PRSS2P07478 247 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 SPINK8P0C7L1 97 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 ODF3L2Q3SX64 289 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-211ENST00000553882 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 FOXI1Q12951 378 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 NPC2P61916 151 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
ACTN1-211ENST00000553882 IGHV3-53P01767 116 aa10.53□□□□□ -0.72
ACTN1-211ENST00000553882 Q1RN00 199 aa10.53□□□□□ -0.72
ACTN1-211ENST00000553882 STHQ8IWL8 128 aa10.53□□□□□ -0.72
ACTN1-211ENST00000553882 WFDC11Q8NEX6 87 aa10.53□□□□□ -0.72
ACTN1-211ENST00000553882 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
ACTN1-211ENST00000553882 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 ERG28Q9UKR5 140 aa10.52□□□□□ -0.73
ACTN1-211ENST00000553882 TRBV20-1A0A075B6N2 111 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 SPATA25Q9BR10 227 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
ACTN1-211ENST00000553882 LITAFQ99732 161 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms