RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 K7EP13 123 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 SPINK8P0C7L1 97 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 CFAP126Q5VTH2 177 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 LSM10Q969L4 123 aaKnown RBP0.01□□□□□ -2.41
LINC00648-201ENST00000553747 NAA60Q9H7X0 242 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 LENEPQ9Y5L5 61 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 LAMC1P11047 1609 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 MYOM1P52179 1685 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 RIMS1Q86UR5 1692 aaKnown RBP0.01□□□□□ -2.41
LINC00648-201ENST00000553747 NALCNQ8IZF0 1738 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 F5P12259 2224 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 CHD9Q3L8U1 2897 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 A2ML1A8K2U0 1454 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 LRP6O75581 1613 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 HIST1H1DP16402 221 aaKnown RBP0□□□□□ -2.41
LINC00648-201ENST00000553747 SSBP3-AS1Q7Z2R9 100 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 KIF21AQ7Z4S6 1674 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 AQP10Q96PS8 301 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 TSC22D3Q99576 134 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 CYP4F30PQ9H0H9 118 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 U3KQA8 63 aa0□□□□□ -2.41
LINC00648-201ENST00000553747 SYNE2Q8WXH0 6885 aaKnown RBP-0□□□□□ -2.41
LINC00648-201ENST00000553747 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 DOCK1Q14185 1865 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 CPSF1Q10570 1443 aaKnown RBP-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 FAM25AB3EWG3 89 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 FAM25CB3EWG5 89 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 FAM25GB3EWG6 89 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 GNG7O60262 68 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 PPP1R17O96001 155 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 FGF7P21781 194 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 FAM107BQ9H098 131 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 R4GMQ9 66 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 F8P00451 2351 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 DOCK2Q92608 1830 aa-0.01□□□□□ -2.41
LINC00648-201ENST00000553747 EIF4G3O43432 1585 aaKnown RBP-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 A0A0D9SFI3 127 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 RBM3P98179 157 aaKnown RBP-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 MEIG1Q5JSS6 88 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 SMIM4Q8WVI0 70 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 AMELXQ99217 191 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 PRO0255Q9UI72 69 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 CSMD3Q7Z407 3707 aa-0.02□□□□□ -2.41
LINC00648-201ENST00000553747 WNK3Q9BYP7 1800 aa-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 CADP27708 2225 aa-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 Q56UQ5 140 aa-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 V9GYH0 126 aa-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 ROBO1Q9Y6N7 1651 aa-0.03□□□□□ -2.41
LINC00648-201ENST00000553747 COL7A1Q02388 2944 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 MYH8P13535 1937 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 MIF4GDA9UHW6 222 aaKnown RBP-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 M0R135 149 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 COX17Q14061 63 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 C10orf128Q5T292 105 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 TTC9CQ8N5M4 171 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 SCN3BQ9NY72 215 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 ARHGEF5Q12774 1597 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 MYOM2P54296 1465 aa-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 ANKRD17O75179 2603 aaKnown RBP-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 SMG6Q86US8 1419 aaKnown RBP-0.04□□□□□ -2.42
LINC00648-201ENST00000553747 PPRC1Q5VV67 1664 aaKnown RBP-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 RAPGEF6Q8TEU7 1601 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 ZFHX3Q15911 3703 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 DIP2CQ9Y2E4 1556 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 SPAG11BQ08648 103 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 SPAG11AQ6PDA7 123 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 C8orf59Q8N0T1 100 aaPredicted RBP-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 PPP3R2Q96LZ3 170 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 NDUFA4L2Q9NRX3 87 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 SPCS1Q9Y6A9 102 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 KMT2AQ03164 3969 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 FSIP2Q5CZC0 6907 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 MYH7P12883 1935 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 TET3O43151 1660 aa-0.05□□□□□ -2.42
LINC00648-201ENST00000553747 KTN1Q86UP2 1357 aaKnown RBP-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 SBF2Q86WG5 1849 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 ZNF236Q9UL36 1845 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 ERCC6L2Q5T890 1561 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 HIVEP3Q5T1R4 2406 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 UNC79Q9P2D8 2635 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 CTXND1A0A1B0GTU2 59 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 LOC100130705A0A1B0GUX0 176 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 M0R3E3 92 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 APOC2P02655 101 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 WFDC2Q14508 124 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 Q5VSD8 79 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 COMMD6Q7Z4G1 85 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 MGST2Q99735 147 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 SPANXDQ9BXN6 97 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 NPVFQ9HCQ7 196 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 PAPPAQ13219 1627 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 PLXNB2O15031 1838 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 CACNA1CQ13936 2221 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 KIAA0100Q14667 2235 aaKnown RBP-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 ASXL3Q9C0F0 2248 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 NRKQ7Z2Y5 1582 aa-0.06□□□□□ -2.42
LINC00648-201ENST00000553747 TRBV7-3A0A075B6L6 115 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms